Os02g0804800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0804800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.89 | 0.387 | 8.44 | -0.0554 | 0.403 | -0.633 | 0.714 | 0.144 | 0.372 | 20.4 | 19.9 | 125 | -- | -- |
| 67.97 | 0.384 | 8.44 | -0.0329 | 0.397 | -0.649 | 0.727 | -- | 0.377 | 20.5 | 19.96 | 128 | -- | -- |
| 69.47 | 0.388 | 8.44 | -0.0844 | 0.399 | -0.651 | -- | 0.144 | 0.369 | 20.4 | 19.93 | 134 | -- | -- |
| 69.55 | 0.388 | 8.44 | -0.0654 | 0.396 | -0.67 | -- | -- | 0.373 | 20.5 | 19.96 | 139 | -- | -- |
| 77.1 | 0.409 | 8.42 | -0.067 | -- | -0.611 | -- | -0.116 | 0.376 | -- | 20.6 | 343 | -- | -- |
| 82.23 | 0.425 | 8.41 | 0.149 | 0.4 | -- | 0.85 | -- | 0.485 | 19.6 | -- | -- | -- | -- |
| 84.18 | 0.43 | 8.41 | 0.13 | 0.405 | -- | -- | -- | 0.487 | 19.2 | -- | -- | -- | -- |
| 76.86 | 0.408 | 8.44 | -0.1 | -- | -0.659 | -- | -- | 0.334 | -- | 20.8 | 355 | -- | -- |
| 69.65 | 0.389 | 8.44 | -- | 0.397 | -0.654 | -- | -- | 0.383 | 20.4 | 19.96 | 137 | -- | -- |
| 92.86 | 0.45 | 8.4 | 0.123 | -- | -- | -- | -- | 0.48 | -- | -- | -- | -- | -- |
| 84.62 | 0.43 | 8.42 | -- | 0.404 | -- | -- | -- | 0.473 | 19.3 | -- | -- | -- | -- |
| 77.08 | 0.409 | 8.44 | -- | -- | -0.64 | -- | -- | 0.345 | -- | 20.8 | 354 | -- | -- |
| 93.26 | 0.451 | 8.41 | -- | -- | -- | -- | -- | 0.467 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 62.93 | temperature | 20 | 30 | > th | dose independent | rect. | 9 | 19 |
| 4 | 63.55 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 21 |
| 6 | 63.81 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 14 |
| 14 | 64.68 | wind | 3 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 20 | 64.90 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 9 |
| 21 | 64.92 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 30 | 65.05 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 43 | 65.19 | wind | 1 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 44 | 65.20 | wind | 3 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 50 | 65.23 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 63 | 65.39 | wind | 3 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 71 | 65.45 | wind | 9 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 74 | 65.46 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 14 |
| 82 | 65.53 | wind | 3 | 14400 | < th | dose dependent | sin | 7 | NA |
| 88 | 65.54 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 11 |
| 103 | 65.58 | wind | 3 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 107 | 65.61 | wind | 1 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 111 | 65.62 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 16 |
| 126 | 65.68 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 144 | 65.77 | wind | 3 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 148 | 65.78 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 150 | 65.78 | wind | 1 | 14400 | > th | dose dependent | rect. | 1 | 6 |
| 195 | 65.90 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 20 |
| 197 | 65.91 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 220 | 65.99 | wind | 3 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 228 | 65.99 | wind | 1 | 14400 | > th | dose dependent | rect. | 23 | 8 |
| 244 | 66.06 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 304 | 66.23 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 309 | 66.24 | wind | 3 | 14400 | > th | dose independent | rect. | 1 | 12 |
| 312 | 66.25 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 18 |
| 320 | 66.27 | wind | 3 | 14400 | < th | dose independent | sin | 7 | NA |
| 389 | 66.39 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 394 | 66.40 | temperature | 20 | 90 | > th | dose independent | rect. | 19 | 9 |
| 401 | 66.42 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 444 | 66.50 | wind | 3 | 14400 | > th | dose independent | sin | 7 | NA |
| 464 | 66.55 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 488 | 66.59 | temperature | 20 | 10 | > th | dose independent | rect. | 6 | 23 |
| 490 | 66.60 | wind | 9 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 584 | 66.79 | temperature | 15 | 30 | > th | dose dependent | rect. | 9 | 19 |
| 624 | 66.90 | temperature | 20 | 90 | < th | dose independent | sin | 8 | NA |
| 636 | 66.92 | wind | 9 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 697 | 67.05 | temperature | 20 | 90 | < th | dose independent | rect. | 11 | 20 |
| 730 | 67.12 | wind | 1 | 14400 | > th | dose dependent | sin | 7 | NA |
| 785 | 67.26 | temperature | 20 | 90 | > th | dose independent | sin | 8 | NA |
| 832 | 67.35 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 21 |
| 858 | 67.41 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 5 |
| 859 | 67.41 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 5 |
| 913 | 67.51 | temperature | 20 | 10 | < th | dose independent | sin | 7 | NA |
| 935 | 67.56 | temperature | 20 | 90 | < th | dose independent | rect. | 17 | 14 |
| 958 | 67.64 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 7 |
| 959 | 67.64 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 7 |
| 969 | 67.65 | wind | 1 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 995 | 67.70 | temperature | 20 | 90 | < th | dose independent | rect. | 17 | 19 |