Os02g0804500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Chaperone DnaJ family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0804500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Chaperone DnaJ family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.83 | 0.351 | 9.8 | 0.0643 | 1.05 | 0.351 | 0.564 | -1.97 | -0.256 | 16.2 | 19.03 | 1900 | -- | -- |
| 59.76 | 0.36 | 9.84 | -0.0197 | 1.02 | 1 | 0.645 | -- | -0.292 | 16.3 | 17.2 | 6249 | -- | -- |
| 56.71 | 0.351 | 9.8 | 0.0691 | 1.05 | 0.357 | -- | -1.99 | -0.253 | 16.2 | 19.05 | 1880 | -- | -- |
| 60.7 | 0.363 | 9.84 | -0.00177 | 1.04 | 1.02 | -- | -- | -0.286 | 16.2 | 17.19 | 6248 | -- | -- |
| 113.37 | 0.496 | 9.77 | 0.238 | -- | 0.565 | -- | -1.63 | -0.0855 | -- | 24 | 2629 | -- | -- |
| 69.58 | 0.391 | 9.88 | -0.458 | 1.05 | -- | 0.585 | -- | -0.43 | 16.2 | -- | -- | -- | -- |
| 70.54 | 0.393 | 9.87 | -0.452 | 1.05 | -- | -- | -- | -0.427 | 16.2 | -- | -- | -- | -- |
| 118.88 | 0.508 | 9.83 | 0.0771 | -- | 1.05 | -- | -- | -0.284 | -- | 17.1 | 9512 | -- | -- |
| 60.7 | 0.363 | 9.84 | -- | 1.04 | 1.02 | -- | -- | -0.285 | 16.2 | 17.16 | 6248 | -- | -- |
| 130.06 | 0.533 | 9.87 | -0.494 | -- | -- | -- | -- | -0.455 | -- | -- | -- | -- | -- |
| 75.92 | 0.408 | 9.86 | -- | 1.06 | -- | -- | -- | -0.377 | 16.2 | -- | -- | -- | -- |
| 118.56 | 0.507 | 9.83 | -- | -- | 0.815 | -- | -- | -0.28 | -- | 14.4 | 38844 | -- | -- |
| 136.51 | 0.545 | 9.86 | -- | -- | -- | -- | -- | -0.4 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 53.03 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 2 | 53.78 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 11 |
| 3 | 53.83 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 9 |
| 6 | 53.97 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 11 |
| 10 | 54.12 | temperature | 20 | 270 | > th | dose independent | rect. | 10 | 20 |
| 12 | 54.15 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 13 |
| 13 | 54.16 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 15 | 54.24 | temperature | 25 | 720 | < th | dose dependent | sin | 15 | NA |
| 19 | 54.29 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 16 |
| 21 | 54.31 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 38 | 54.45 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 6 |
| 40 | 54.46 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 8 |
| 43 | 54.47 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 53 | 54.54 | wind | 3 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 56 | 54.55 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 9 |
| 65 | 54.61 | humidity | 90 | 14400 | > th | dose dependent | sin | 5 | NA |
| 67 | 54.62 | wind | 3 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 90 | 54.72 | humidity | 90 | 14400 | > th | dose dependent | rect. | 12 | 18 |
| 116 | 54.85 | wind | 1 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 187 | 55.14 | temperature | 15 | 720 | > th | dose dependent | sin | 13 | NA |
| 203 | 55.18 | wind | 3 | 43200 | < th | dose independent | rect. | 12 | 3 |
| 219 | 55.21 | wind | 5 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 243 | 55.27 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 267 | 55.30 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 273 | 55.31 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 10 |
| 276 | 55.32 | radiation | 40 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 298 | 55.36 | humidity | 90 | 14400 | > th | dose independent | sin | 9 | NA |
| 302 | 55.36 | humidity | 90 | 14400 | > th | dose independent | rect. | 16 | 14 |
| 317 | 55.38 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 343 | 55.43 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 9 |
| 364 | 55.48 | wind | 3 | 43200 | > th | dose independent | rect. | 11 | 5 |
| 371 | 55.49 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 375 | 55.49 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 385 | 55.52 | wind | 1 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 412 | 55.57 | wind | 1 | 43200 | < th | dose dependent | rect. | 9 | 17 |
| 416 | 55.58 | temperature | 25 | 270 | < th | dose dependent | sin | 10 | NA |
| 501 | 55.79 | wind | 3 | 43200 | < th | dose dependent | rect. | 9 | 6 |
| 533 | 55.84 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 3 |
| 551 | 55.88 | temperature | 25 | 270 | < th | dose dependent | rect. | 17 | 16 |
| 569 | 55.92 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 589 | 55.96 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 13 |
| 597 | 55.98 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 602 | 55.98 | radiation | 20 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 618 | 55.99 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 3 |
| 633 | 56.02 | wind | 3 | 43200 | > th | dose independent | rect. | 11 | 11 |
| 643 | 56.03 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 655 | 56.05 | wind | 3 | 43200 | < th | dose independent | rect. | 11 | 11 |
| 656 | 56.05 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 12 |
| 685 | 56.08 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 758 | 56.17 | temperature | 20 | 270 | > th | dose independent | sin | 11 | NA |
| 759 | 56.17 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 21 |
| 762 | 56.18 | wind | 9 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 773 | 56.18 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 15 |
| 774 | 56.18 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 21 |
| 786 | 56.19 | radiation | 1 | 14400 | < th | dose dependent | rect. | 16 | 16 |
| 791 | 56.20 | radiation | 1 | 14400 | < th | dose dependent | sin | 12 | NA |
| 808 | 56.21 | radiation | 1 | 14400 | < th | dose dependent | rect. | 10 | 22 |
| 828 | 56.23 | humidity | 80 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 847 | 56.24 | radiation | 1 | 14400 | < th | dose dependent | rect. | 14 | 22 |
| 851 | 56.25 | radiation | 1 | 14400 | < th | dose dependent | no | NA | NA |
| 854 | 56.25 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 16 |
| 856 | 56.25 | radiation | 1 | 14400 | < th | dose dependent | rect. | 1 | 19 |
| 862 | 56.25 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 21 |
| 874 | 56.25 | radiation | 1 | 14400 | < th | dose dependent | rect. | 7 | 23 |
| 885 | 56.26 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 21 |
| 951 | 56.28 | radiation | 1 | 14400 | < th | dose dependent | rect. | 16 | 13 |
| 961 | 56.29 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 14 |
| 966 | 56.30 | wind | 3 | 43200 | > th | dose independent | sin | 20 | NA |
| 969 | 56.30 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 12 |