Os02g0804400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0804400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.03 | 0.415 | 10.5 | -0.0449 | 2.18 | 1.21 | -0.905 | 0.56 | -0.458 | 23.5 | 19.35 | 6374 | -- | -- |
| 78.49 | 0.413 | 10.5 | 0.0499 | 2.18 | 1.1 | -0.831 | -- | -0.449 | 23.5 | 19.4 | 6422 | -- | -- |
| 81.5 | 0.42 | 10.5 | -0.0168 | 2.19 | 1.25 | -- | 0.675 | -0.458 | 23.5 | 19.25 | 6300 | -- | -- |
| 81.83 | 0.421 | 10.5 | 0.0383 | 2.18 | 1.07 | -- | -- | -0.446 | 23.5 | 19.29 | 6251 | -- | -- |
| 353.54 | 0.881 | 10.4 | -0.242 | -- | 0.998 | -- | -0.616 | -0.535 | -- | 19.25 | 6300 | -- | -- |
| 94.53 | 0.456 | 10.5 | -0.713 | 2.16 | -- | -0.925 | -- | -0.727 | 23.5 | -- | -- | -- | -- |
| 98.22 | 0.464 | 10.5 | -0.676 | 2.16 | -- | -- | -- | -0.723 | 23.5 | -- | -- | -- | -- |
| 354.94 | 0.881 | 10.4 | -0.304 | -- | 1.08 | -- | -- | -0.55 | -- | 19.25 | 6300 | -- | -- |
| 81.84 | 0.421 | 10.5 | -- | 2.17 | 1.05 | -- | -- | -0.458 | 23.5 | 19.24 | 6226 | -- | -- |
| 392.04 | 0.925 | 10.5 | -0.617 | -- | -- | -- | -- | -0.7 | -- | -- | -- | -- | -- |
| 110.26 | 0.491 | 10.5 | -- | 2.16 | -- | -- | -- | -0.648 | 23.5 | -- | -- | -- | -- |
| 357.22 | 0.883 | 10.4 | -- | -- | 1.15 | -- | -- | -0.509 | -- | 19.25 | 6300 | -- | -- |
| 402.09 | 0.936 | 10.5 | -- | -- | -- | -- | -- | -0.631 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.09 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 9 |
| 4 | 71.34 | temperature | 15 | 10 | > th | dose dependent | sin | 4 | NA |
| 9 | 71.56 | temperature | 30 | 10 | < th | dose dependent | sin | 3 | NA |
| 10 | 71.63 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 16 |
| 12 | 71.75 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 14 |
| 18 | 72.05 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 8 |
| 37 | 72.73 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 16 |
| 52 | 73.04 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 12 |
| 58 | 73.23 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 14 |
| 93 | 73.97 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 14 |
| 94 | 73.97 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 19 |
| 116 | 74.41 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 10 |
| 248 | 76.00 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 9 |
| 352 | 76.97 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 495 | 78.11 | wind | 1 | 43200 | < th | dose dependent | rect. | 9 | 23 |
| 496 | 78.13 | wind | 1 | 43200 | < th | dose dependent | rect. | 16 | 21 |
| 508 | 78.23 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 14 |
| 510 | 78.23 | wind | 1 | 43200 | < th | dose dependent | rect. | 3 | 22 |
| 517 | 78.26 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 23 |
| 526 | 78.31 | wind | 1 | 43200 | < th | dose dependent | rect. | 21 | 23 |
| 531 | 78.34 | wind | 5 | 14400 | > th | dose independent | rect. | 2 | 12 |
| 532 | 78.34 | wind | 1 | 43200 | < th | dose dependent | no | NA | NA |
| 552 | 78.45 | wind | 1 | 43200 | < th | dose dependent | rect. | 5 | 23 |
| 555 | 78.48 | wind | 5 | 14400 | < th | dose independent | rect. | 2 | 12 |
| 567 | 78.51 | wind | 1 | 43200 | > th | dose independent | rect. | 17 | 19 |
| 581 | 78.54 | wind | 1 | 43200 | < th | dose dependent | rect. | 7 | 23 |
| 585 | 78.56 | temperature | 25 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 590 | 78.58 | temperature | 25 | 10 | > th | dose independent | rect. | 5 | 8 |
| 605 | 78.62 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 16 |
| 612 | 78.64 | wind | 5 | 14400 | > th | dose independent | rect. | 20 | 18 |
| 619 | 78.67 | wind | 1 | 43200 | < th | dose independent | rect. | 17 | 20 |
| 628 | 78.70 | temperature | 15 | 90 | > th | dose dependent | rect. | 5 | 19 |
| 631 | 78.71 | wind | 1 | 43200 | < th | dose independent | rect. | 19 | 18 |
| 645 | 78.76 | wind | 5 | 14400 | > th | dose independent | rect. | 8 | 4 |
| 658 | 78.78 | wind | 5 | 14400 | < th | dose independent | rect. | 20 | 18 |
| 663 | 78.80 | wind | 5 | 14400 | > th | dose independent | sin | 5 | NA |
| 664 | 78.81 | wind | 5 | 14400 | < th | dose independent | rect. | 8 | 4 |
| 668 | 78.81 | humidity | 70 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 670 | 78.82 | temperature | 25 | 90 | > th | dose independent | rect. | 6 | 6 |
| 680 | 78.84 | humidity | 70 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 686 | 78.85 | humidity | 70 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 696 | 78.86 | temperature | 25 | 90 | < th | dose dependent | rect. | 5 | 10 |
| 747 | 78.97 | wind | 5 | 14400 | < th | dose independent | sin | 5 | NA |
| 762 | 79.00 | humidity | 70 | 43200 | < th | dose independent | rect. | 2 | 6 |
| 773 | 79.01 | temperature | 15 | 10 | > th | dose dependent | rect. | 5 | 19 |
| 793 | 79.07 | wind | 1 | 43200 | < th | dose dependent | rect. | 21 | 16 |
| 804 | 79.09 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 19 |
| 882 | 79.26 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 13 |
| 984 | 79.48 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 17 |
| 999 | 79.51 | humidity | 70 | 43200 | > th | dose independent | rect. | 2 | 6 |