Os02g0800600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0800600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.57 | 0.268 | 9.41 | -0.637 | 0.571 | -0.641 | -0.463 | -1.11 | -0.0289 | 7.47 | 25.64 | 2 | -- | -- |
| 34.75 | 0.277 | 9.43 | -0.814 | 0.58 | -0.582 | -0.363 | -- | -0.0717 | 7.32 | 26.3 | 3 | -- | -- |
| 33.11 | 0.27 | 9.41 | -0.659 | 0.574 | -0.657 | -- | -1.06 | -0.0349 | 7.3 | 25.74 | 2 | -- | -- |
| 35.1 | 0.278 | 9.43 | -0.822 | 0.574 | -0.584 | -- | -- | -0.0695 | 7.38 | 25.94 | 2 | -- | -- |
| 49.82 | 0.331 | 9.42 | -0.675 | -- | -0.745 | -- | -1.12 | -0.0144 | -- | 24.25 | 2 | -- | -- |
| 39.87 | 0.296 | 9.4 | -0.676 | 0.58 | -- | -0.345 | -- | 0.0554 | 8.29 | -- | -- | -- | -- |
| 40.24 | 0.297 | 9.4 | -0.686 | 0.58 | -- | -- | -- | 0.0556 | 8.33 | -- | -- | -- | -- |
| 51.98 | 0.337 | 9.44 | -0.827 | -- | -0.645 | -- | -- | -0.0511 | -- | 24.5 | 2 | -- | -- |
| 51.37 | 0.336 | 9.39 | -- | 0.568 | -0.279 | -- | -- | 0.0795 | 7.97 | 25.94 | 2 | -- | -- |
| 58.93 | 0.359 | 9.41 | -0.683 | -- | -- | -- | -- | 0.0619 | -- | -- | -- | -- | -- |
| 52.66 | 0.339 | 9.38 | -- | 0.577 | -- | -- | -- | 0.132 | 8.41 | -- | -- | -- | -- |
| 68.71 | 0.387 | 9.41 | -- | -- | -0.373 | -- | -- | 0.0815 | -- | 24.5 | 2 | -- | -- |
| 71.23 | 0.394 | 9.4 | -- | -- | -- | -- | -- | 0.138 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.38 | temperature | 25 | 10 | < th | dose dependent | rect. | 9 | 21 |
| 23 | 32.69 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 25 | 32.71 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 8 |
| 31 | 32.75 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 44 | 32.78 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 45 | 32.79 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 48 | 32.79 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 53 | 32.80 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 60 | 32.82 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 61 | 32.82 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 66 | 32.84 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 5 |
| 74 | 32.85 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 84 | 32.87 | wind | 3 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 94 | 32.89 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 99 | 32.89 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 104 | 32.91 | wind | 3 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 124 | 32.98 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 184 | 33.23 | wind | 9 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 253 | 33.36 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 295 | 33.51 | humidity | 90 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 323 | 33.59 | wind | 1 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 338 | 33.64 | humidity | 90 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 357 | 33.68 | humidity | 90 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 362 | 33.70 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 366 | 33.71 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 381 | 33.73 | wind | 1 | 14400 | < th | dose dependent | rect. | 9 | 3 |
| 396 | 33.77 | wind | 3 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 398 | 33.77 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 18 |
| 423 | 33.84 | temperature | 25 | 10 | < th | dose dependent | sin | 18 | NA |
| 441 | 33.87 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 462 | 33.91 | temperature | 25 | 720 | < th | dose dependent | sin | 21 | NA |
| 463 | 33.91 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 6 |
| 470 | 33.93 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 496 | 33.97 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 500 | 33.98 | wind | 1 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 507 | 33.99 | wind | 3 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 519 | 34.00 | wind | 1 | 14400 | < th | dose independent | rect. | 9 | 4 |
| 540 | 34.03 | wind | 1 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 555 | 34.06 | humidity | 80 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 561 | 34.07 | wind | 3 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 562 | 34.07 | wind | 3 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 588 | 34.10 | humidity | 80 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 606 | 34.12 | temperature | 20 | 10 | > th | dose dependent | sin | 10 | NA |
| 613 | 34.13 | wind | 3 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 622 | 34.14 | temperature | 20 | 90 | > th | dose dependent | sin | 10 | NA |
| 652 | 34.17 | wind | 3 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 694 | 34.21 | wind | 3 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 729 | 34.24 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 11 |
| 775 | 34.29 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 856 | 34.35 | wind | 3 | 14400 | < th | dose independent | rect. | 22 | 18 |
| 857 | 34.35 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 863 | 34.35 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 908 | 34.39 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 7 |
| 916 | 34.40 | wind | 3 | 14400 | < th | dose independent | sin | 7 | NA |
| 918 | 34.40 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 951 | 34.41 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 953 | 34.42 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 959 | 34.42 | wind | 1 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 968 | 34.43 | humidity | 70 | 14400 | > th | dose independent | rect. | 22 | 10 |
| 972 | 34.43 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 975 | 34.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 6 |