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Os02g0799600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.2 (0.0255) R2 : 0.69
β1 : 1.51 (0.0927) R2dD : 0.184 R2D : 0.0937
β2 : 1.9 (0.0952) R2dC : 0.674 R2C : -0.599
β3 : -2 (0.0833) R2dE : 0.958 R2E : -0.281
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.785 (0.0542) R2dN8 : 0.19 R2N8 : 0.114
σ : 0.473
deviance : 103.28
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C
peak time of C : 22.6
E
wheather : radiation
threshold : 0.05604
memory length : 117
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 5.23
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
103.15 0.477 12.2 1.52 1.92 -2 0.301 -0.441 0.782 22.6 0.2417 109 5.17 --
103.77 0.474 12.2 1.51 1.92 -2 0.227 -- 0.783 22.6 0.04235 116 5.33 --
103.15 0.473 12.2 1.51 1.93 -2 -- -0.208 0.788 22.6 0.2401 113 5.22 --
103.28 0.473 12.2 1.51 1.9 -2 -- -- 0.785 22.6 0.05604 117 5.23 --
141.24 0.554 12.1 1.63 -- -1.32 -- -0.433 0.859 -- 146.7 604 5.68 --
140.6 0.556 12.1 1.56 1.33 -- 0.407 -- 0.899 17.3 -- -- -- --
141.01 0.556 12.1 1.56 1.33 -- -- -- 0.901 17.3 -- -- -- --
141.02 0.553 12.1 1.56 -- -1.35 -- -- 0.9 -- 207.7 632 6 --
162.81 0.594 12.2 -- 1.82 -1.84 -- -- 0.675 22.4 0.05957 117 5.52 --
233.27 0.714 12.1 1.51 -- -- -- -- 0.868 -- -- -- -- --
204.77 0.669 12.2 -- 1.3 -- -- -- 0.728 17.3 -- -- -- --
204.71 0.666 12.1 -- -- -1.32 -- -- 0.725 -- 222.6 658 6.17 --
293.36 0.799 12.2 -- -- -- -- -- 0.7 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 101.16 precipitation 0.1 270 < th dose independent rect. 18 10
2 101.16 precipitation 0.1 270 < th dose dependent rect. 18 10
5 102.73 radiation 40.0 90 < th dose dependent rect. 5 14
7 103.35 temperature 15.0 90 > th dose independent rect. 5 14
9 103.91 radiation 1.0 90 < th dose dependent rect. 19 10
11 103.98 wind 9.0 90 < th dose independent rect. 5 14
13 104.00 radiation 1.0 90 < th dose independent rect. 19 10
15 104.00 radiation 40.0 270 < th dose independent rect. 13 19
16 104.04 wind 9.0 90 < th dose independent rect. 19 10
21 104.13 temperature 10.0 90 > th dose independent rect. 19 10
22 104.13 temperature 30.0 90 < th dose independent rect. 19 10
23 104.13 humidity 50.0 90 > th dose independent rect. 19 10
25 104.13 atmosphere 995.0 90 > th dose independent rect. 19 10
30 104.13 atmosphere 1015.0 90 < th dose independent rect. 5 14
45 104.52 radiation 20.0 90 < th dose independent rect. 5 14
48 104.76 precipitation 0.1 270 < th dose independent rect. 7 21
49 104.76 precipitation 0.1 270 < th dose dependent rect. 7 21
50 104.89 temperature 10.0 270 > th dose dependent rect. 4 3
51 104.93 radiation 20.0 10 < th dose dependent rect. 6 14
56 105.36 radiation 10.0 10 < th dose dependent rect. 20 10
63 105.73 humidity 50.0 90 > th dose dependent rect. 5 14
71 106.06 wind 5.0 270 < th dose independent rect. 4 3
72 106.08 radiation 1.0 90 < th dose dependent sin 11 NA
79 106.43 wind 9.0 270 < th dose dependent rect. 4 3
87 106.66 precipitation 0.1 270 < th dose independent rect. 4 14
88 106.66 precipitation 0.1 270 < th dose dependent rect. 4 14
101 107.04 radiation 1.0 90 < th dose dependent rect. 19 16
103 107.06 temperature 10.0 270 > th dose dependent rect. 3 5
109 107.09 humidity 80.0 270 > th dose independent rect. 4 3
136 107.34 humidity 50.0 270 > th dose dependent rect. 4 3
138 107.36 temperature 10.0 270 > th dose independent rect. 4 3
140 107.36 temperature 30.0 270 < th dose independent rect. 4 3
141 107.36 humidity 50.0 270 > th dose independent rect. 4 3
143 107.36 atmosphere 995.0 270 > th dose independent rect. 4 3
144 107.36 atmosphere 1015.0 270 < th dose independent rect. 4 3
145 107.36 radiation 30.0 270 < th dose independent rect. 4 3
147 107.36 atmosphere 995.0 90 > th dose independent rect. 5 14
148 107.36 temperature 10.0 270 > th dose independent rect. 7 21
153 107.46 temperature 15.0 270 > th dose dependent rect. 5 1
154 107.49 radiation 40.0 270 < th dose dependent rect. 4 3
159 107.58 wind 3.0 270 < th dose independent rect. 5 1
160 107.61 wind 9.0 270 < th dose independent rect. 7 21
164 107.71 precipitation 0.1 270 < th dose independent rect. 4 3
165 107.71 precipitation 0.1 270 < th dose dependent rect. 4 3
172 107.86 precipitation 0.1 270 < th dose independent rect. 6 23
173 107.86 precipitation 0.1 270 < th dose dependent rect. 6 23
178 107.96 wind 5.0 270 < th dose dependent rect. 5 1
202 108.20 precipitation 0.1 270 < th dose independent rect. 8 6
203 108.20 precipitation 0.1 270 < th dose dependent rect. 8 6
206 108.22 temperature 10.0 270 > th dose dependent rect. 8 6
211 108.27 radiation 20.0 10 < th dose dependent sin 20 NA
221 108.50 radiation 10.0 30 > th dose independent rect. 10 7
223 108.54 precipitation 0.1 90 < th dose independent rect. 9 20
225 108.54 precipitation 0.1 90 < th dose dependent rect. 9 20
226 108.55 wind 5.0 270 < th dose independent rect. 3 5
228 108.58 temperature 10.0 270 > th dose independent rect. 8 6
229 108.58 atmosphere 995.0 270 > th dose independent rect. 8 6
230 108.58 atmosphere 1015.0 270 < th dose independent rect. 8 6
231 108.58 temperature 10.0 270 > th dose independent rect. 14 18
236 108.62 wind 9.0 270 < th dose independent rect. 8 6
239 108.64 radiation 1.0 270 > th dose independent rect. 8 6
241 108.68 temperature 20.0 270 > th dose independent rect. 3 5
244 108.72 humidity 70.0 90 > th dose independent rect. 5 14
245 108.76 wind 1.0 270 > th dose independent rect. 8 6
249 108.80 humidity 50.0 90 > th dose dependent rect. 5 5
251 108.81 humidity 50.0 270 > th dose dependent rect. 3 5
267 108.83 wind 9.0 270 < th dose independent rect. 14 18
288 108.96 humidity 80.0 270 > th dose independent rect. 3 5
295 109.05 wind 9.0 30 < th dose dependent rect. 5 5
312 109.19 radiation 40.0 90 < th dose dependent rect. 13 21
323 109.27 radiation 1.0 90 < th dose independent sin 11 NA
329 109.33 radiation 1.0 90 > th dose independent sin 11 NA
334 109.36 atmosphere 995.0 270 > th dose independent rect. 14 18
393 109.63 humidity 90.0 270 < th dose independent rect. 8 6
403 109.68 wind 5.0 10 < th dose independent rect. 5 5
406 109.70 temperature 10.0 10 > th dose dependent rect. 5 5
413 109.75 humidity 80.0 270 > th dose independent rect. 5 1
414 109.77 wind 9.0 270 < th dose dependent rect. 3 5
438 109.90 temperature 10.0 270 > th dose independent rect. 3 5
440 109.90 temperature 30.0 270 < th dose independent rect. 3 5
441 109.90 humidity 50.0 270 > th dose independent rect. 3 5
443 109.90 atmosphere 995.0 270 > th dose independent rect. 3 5
444 109.90 atmosphere 1015.0 270 < th dose independent rect. 3 5
445 109.90 temperature 10.0 270 > th dose independent rect. 8 19
448 109.93 wind 1.0 270 > th dose independent rect. 8 19
450 109.94 wind 9.0 270 < th dose independent rect. 8 19
457 110.01 radiation 40.0 90 < th dose independent rect. 5 14
459 110.02 atmosphere 995.0 270 > th dose dependent rect. 4 3
483 110.09 radiation 40.0 270 < th dose independent rect. 3 5
488 110.13 wind 9.0 10 < th dose independent rect. 10 19
497 110.19 radiation 40.0 270 < th dose dependent rect. 3 5
502 110.22 temperature 10.0 10 > th dose independent rect. 5 5
504 110.22 humidity 50.0 10 > th dose independent rect. 5 5
505 110.22 atmosphere 995.0 10 > th dose independent rect. 5 5
506 110.22 atmosphere 1015.0 10 < th dose independent rect. 5 5
508 110.22 temperature 10.0 10 > th dose independent rect. 10 19
522 110.28 temperature 20.0 270 > th dose independent rect. 5 1
533 110.29 precipitation 0.1 10 < th dose independent rect. 5 5
536 110.29 precipitation 0.1 10 < th dose dependent rect. 5 5
562 110.40 radiation 40.0 90 < th dose dependent rect. 5 5
570 110.46 precipitation 0.1 10 < th dose independent rect. 5 15
574 110.46 precipitation 0.1 10 < th dose dependent rect. 5 15
590 110.53 temperature 10.0 270 > th dose independent rect. 5 1
592 110.53 temperature 30.0 270 < th dose independent rect. 5 1
593 110.53 humidity 50.0 270 > th dose independent rect. 5 1
596 110.53 atmosphere 995.0 270 > th dose independent rect. 5 1
597 110.53 atmosphere 1015.0 270 < th dose independent rect. 5 1
598 110.53 radiation 20.0 270 < th dose independent rect. 5 1
601 110.53 temperature 10.0 270 > th dose independent rect. 6 23
602 110.53 humidity 50.0 270 > th dose dependent rect. 5 1
611 110.61 radiation 10.0 270 > th dose independent rect. 9 4
620 110.64 radiation 40.0 90 < th dose dependent rect. 15 19
625 110.66 wind 1.0 270 > th dose independent rect. 7 21
627 110.68 precipitation 0.1 270 < th dose independent rect. 5 1
629 110.68 precipitation 0.1 270 < th dose dependent rect. 5 1
631 110.69 humidity 50.0 270 > th dose independent rect. 14 18
649 110.77 humidity 70.0 270 > th dose dependent rect. 3 15
704 110.94 temperature 10.0 1440 > th dose independent rect. 5 6
708 110.94 atmosphere 995.0 1440 > th dose independent rect. 5 6
709 110.94 temperature 10.0 1440 > th dose independent rect. 11 18
724 111.03 radiation 40.0 270 < th dose dependent rect. 5 1
757 111.21 atmosphere 995.0 10 > th dose dependent rect. 5 5
776 111.28 wind 1.0 270 > th dose independent rect. 18 10
792 111.36 radiation 10.0 30 > th dose independent sin 21 NA
798 111.39 precipitation 0.1 270 < th dose independent rect. 3 5
801 111.39 precipitation 0.1 270 < th dose dependent rect. 3 5
812 111.44 radiation 1.0 90 > th dose independent rect. 17 16
880 111.63 radiation 1.0 90 < th dose independent rect. 19 16
902 111.73 radiation 1.0 270 > th dose independent rect. 4 2
928 111.80 humidity 50.0 270 > th dose independent rect. 8 6
931 111.81 precipitation 0.1 270 < th dose independent rect. 23 14
933 111.81 precipitation 0.1 270 < th dose dependent rect. 23 14
941 111.84 atmosphere 995.0 10 > th dose independent rect. 10 19