Os02g0799100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0799100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 80.43 | 0.421 | 6.23 | -1.18 | 0.68 | -0.331 | -0.141 | -2.41 | 0.0963 | 16.5 | 1015 | 5821 | -- | -- |
| 94.04 | 0.452 | 6.31 | -1.72 | 0.686 | -0.254 | -0.0854 | -- | -0.0473 | 16.7 | 1013 | 24960 | -- | -- |
| 80.43 | 0.418 | 6.24 | -1.18 | 0.678 | -0.245 | -- | -2.18 | 0.0873 | 16.5 | 1014 | 5805 | -- | -- |
| 93.98 | 0.452 | 6.3 | -1.71 | 0.692 | -0.262 | -- | -- | -0.0529 | 16.5 | 1013 | 24968 | -- | -- |
| 105.04 | 0.477 | 6.22 | -1.16 | -- | -0.212 | -- | -2.23 | 0.0974 | -- | 1014 | 5858 | -- | -- |
| 95.47 | 0.458 | 6.29 | -1.58 | 0.689 | -- | -0.25 | -- | 0.0131 | 16.5 | -- | -- | -- | -- |
| 95.63 | 0.458 | 6.29 | -1.59 | 0.688 | -- | -- | -- | 0.0118 | 16.5 | -- | -- | -- | -- |
| 119.71 | 0.51 | 6.3 | -1.73 | -- | -0.227 | -- | -- | -0.0628 | -- | 1013 | 24982 | -- | -- |
| 120.56 | 0.511 | 6.2 | -- | 0.696 | 1.14 | -- | -- | 0.384 | 16.6 | 1016 | 47520 | -- | -- |
| 120.9 | 0.514 | 6.28 | -1.61 | -- | -- | -- | -- | -0.00634 | -- | -- | -- | -- | -- |
| 161.99 | 0.595 | 6.25 | -- | 0.718 | -- | -- | -- | 0.188 | 16.5 | -- | -- | -- | -- |
| 146.43 | 0.564 | 6.2 | -- | -- | 1.17 | -- | -- | 0.372 | -- | 1015 | 47520 | -- | -- |
| 189.56 | 0.643 | 6.24 | -- | -- | -- | -- | -- | 0.173 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.06 | humidity | 70 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 2 | 81.95 | humidity | 70 | 14400 | < th | dose dependent | rect. | 19 | 14 |
| 4 | 82.57 | humidity | 70 | 14400 | < th | dose independent | rect. | 20 | 13 |
| 5 | 82.59 | humidity | 70 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 9 | 82.86 | humidity | 50 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 10 | 82.90 | humidity | 70 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 11 | 82.96 | humidity | 50 | 14400 | < th | dose dependent | rect. | 16 | 23 |
| 12 | 82.98 | humidity | 50 | 14400 | < th | dose dependent | rect. | 9 | 6 |
| 29 | 83.03 | humidity | 50 | 14400 | < th | dose independent | rect. | 11 | 3 |
| 31 | 83.05 | humidity | 50 | 14400 | < th | dose dependent | rect. | 12 | 3 |
| 32 | 83.06 | humidity | 50 | 14400 | < th | dose dependent | sin | 7 | NA |
| 58 | 83.16 | humidity | 70 | 14400 | > th | dose independent | rect. | 24 | 9 |
| 94 | 83.25 | wind | 5 | 4320 | > th | dose dependent | rect. | 21 | 4 |
| 112 | 83.26 | humidity | 50 | 14400 | < th | dose dependent | no | NA | NA |
| 272 | 83.32 | humidity | 50 | 14400 | > th | dose independent | rect. | 18 | 20 |
| 296 | 83.36 | humidity | 50 | 14400 | < th | dose independent | rect. | 8 | 6 |
| 332 | 83.37 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 353 | 83.41 | humidity | 80 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 356 | 83.45 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 358 | 83.47 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 361 | 83.49 | humidity | 50 | 14400 | > th | dose independent | sin | 8 | NA |
| 366 | 83.54 | wind | 7 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 371 | 83.56 | humidity | 50 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 372 | 83.56 | humidity | 50 | 14400 | > th | dose independent | rect. | 8 | 6 |
| 373 | 83.56 | humidity | 50 | 14400 | > th | dose independent | rect. | 24 | 14 |
| 379 | 83.57 | humidity | 50 | 14400 | > th | dose independent | rect. | 2 | 12 |
| 385 | 83.58 | humidity | 60 | 14400 | < th | dose dependent | rect. | 18 | 16 |
| 391 | 83.61 | humidity | 50 | 14400 | > th | dose independent | rect. | 11 | 3 |
| 394 | 83.63 | humidity | 50 | 14400 | > th | dose independent | rect. | 18 | 17 |
| 399 | 83.67 | humidity | 50 | 14400 | < th | dose independent | sin | 8 | NA |
| 423 | 83.71 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 425 | 83.71 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 428 | 83.75 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 10 | 10 |
| 448 | 83.76 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 463 | 83.81 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 10 | 10 |
| 518 | 83.91 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 12 | 8 |
| 555 | 83.97 | humidity | 90 | 270 | < th | dose independent | rect. | 9 | 19 |
| 573 | 84.00 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 598 | 84.01 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 642 | 84.08 | wind | 7 | 4320 | < th | dose independent | rect. | 21 | 4 |
| 677 | 84.11 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 6 |
| 678 | 84.11 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 13 | 7 |
| 681 | 84.11 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 20 |
| 683 | 84.11 | atmosphere | 1010 | 4320 | > th | dose dependent | rect. | 12 | 1 |
| 705 | 84.13 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 10 | 11 |
| 760 | 84.19 | humidity | 50 | 14400 | > th | dose independent | rect. | 8 | 17 |
| 787 | 84.20 | humidity | 50 | 14400 | > th | dose independent | no | NA | NA |
| 791 | 84.20 | humidity | 50 | 14400 | > th | dose independent | rect. | 8 | 12 |
| 792 | 84.20 | humidity | 50 | 14400 | > th | dose independent | rect. | 8 | 15 |
| 799 | 84.20 | humidity | 50 | 14400 | > th | dose independent | rect. | 24 | 20 |
| 826 | 84.21 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 842 | 84.21 | humidity | 50 | 14400 | > th | dose independent | rect. | 3 | 17 |
| 865 | 84.21 | humidity | 50 | 14400 | > th | dose independent | rect. | 10 | 23 |
| 883 | 84.23 | atmosphere | 1015 | 4320 | < th | dose independent | sin | 21 | NA |
| 884 | 84.23 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 898 | 84.23 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 24 | 6 |
| 899 | 84.23 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 23 | 8 |
| 903 | 84.24 | atmosphere | 1015 | 4320 | > th | dose independent | sin | 21 | NA |
| 909 | 84.25 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 2 | 2 |
| 910 | 84.25 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 916 | 84.25 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 1 | 3 |
| 921 | 84.26 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 958 | 84.28 | atmosphere | 1015 | 14400 | > th | dose independent | sin | 5 | NA |
| 962 | 84.28 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 14 | 3 |
| 969 | 84.28 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 24 | 9 |
| 974 | 84.28 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 23 | 13 |
| 977 | 84.28 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 23 | 14 |
| 995 | 84.29 | atmosphere | 1015 | 14400 | < th | dose independent | sin | 5 | NA |
| 998 | 84.29 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 999 | 84.29 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 10 | 2 |