Os02g0797300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Plasma membrane H+-ATPase (EC 3.6.1.3).
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Os02g0797300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Plasma membrane H+-ATPase (EC 3.6.1.3).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 343.3 | 0.871 | 3.35 | -1.62 | 0.385 | -3.16 | -1.61 | 8 | 0.0448 | 7.49 | 20.8 | 3448 | -- | -- |
| 396.43 | 0.927 | 3.68 | -2.58 | 0.356 | -5.78 | -2.26 | -- | -0.466 | 6.69 | 19 | 3484 | -- | -- |
| 346.36 | 0.867 | 3.32 | -1.48 | 0.363 | -2.98 | -- | 8.48 | 0.147 | 7.91 | 21.4 | 3665 | -- | -- |
| 400.62 | 0.932 | 3.64 | -0.714 | 0.313 | -5.96 | -- | -- | -0.121 | 7.21 | 17 | 24995 | -- | -- |
| 353.86 | 0.876 | 3.32 | -1.42 | -- | -3 | -- | 8.59 | 0.18 | -- | 21.36 | 3647 | -- | -- |
| 834.52 | 1.35 | 3.94 | -5.73 | 0.474 | -- | -1.47 | -- | -1.6 | 8.61 | -- | -- | -- | -- |
| 841.1 | 1.36 | 3.94 | -5.77 | 0.477 | -- | -- | -- | -1.59 | 9.28 | -- | -- | -- | -- |
| 407.41 | 0.94 | 3.61 | -0.428 | -- | -6.22 | -- | -- | 0.00537 | -- | 17.1 | 25057 | -- | -- |
| 398.89 | 0.93 | 3.57 | -- | 0.431 | -6.57 | -- | -- | 0.0942 | 8.86 | 16.93 | 24988 | -- | -- |
| 854.34 | 1.37 | 3.96 | -5.77 | -- | -- | -- | -- | -1.59 | -- | -- | -- | -- | -- |
| 1719.13 | 1.94 | 3.8 | -- | 0.491 | -- | -- | -- | -0.951 | 10.2 | -- | -- | -- | -- |
| 408.52 | 0.941 | 3.6 | -- | -- | -6.53 | -- | -- | 0.113 | -- | 17.1 | 24994 | -- | -- |
| 1733.74 | 1.94 | 3.81 | -- | -- | -- | -- | -- | -0.952 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 342.55 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 4 |
| 2 | 343.58 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 6 | 348.62 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 7 | 349.30 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 4 |
| 42 | 361.50 | temperature | 20 | 4320 | > th | dose independent | sin | 14 | NA |
| 53 | 363.53 | radiation | 1 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 54 | 363.53 | radiation | 1 | 14400 | < th | dose dependent | rect. | 10 | 2 |
| 56 | 364.18 | radiation | 1 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 59 | 364.60 | temperature | 20 | 4320 | < th | dose independent | sin | 14 | NA |
| 65 | 365.02 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 18 |
| 81 | 366.38 | temperature | 20 | 4320 | < th | dose independent | rect. | 16 | 15 |
| 82 | 366.43 | temperature | 20 | 4320 | < th | dose independent | rect. | 16 | 18 |
| 121 | 368.74 | temperature | 20 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 183 | 372.21 | temperature | 25 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 185 | 372.22 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 188 | 372.45 | temperature | 25 | 4320 | < th | dose dependent | rect. | 20 | 5 |
| 196 | 372.93 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 11 |
| 197 | 372.94 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 18 |
| 239 | 373.82 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 2 |
| 243 | 373.92 | temperature | 25 | 4320 | < th | dose dependent | sin | 13 | NA |
| 289 | 374.79 | temperature | 20 | 4320 | > th | dose dependent | rect. | 9 | 6 |
| 306 | 375.15 | temperature | 20 | 4320 | > th | dose dependent | rect. | 9 | 11 |
| 308 | 375.17 | temperature | 25 | 4320 | > th | dose independent | rect. | 11 | 4 |
| 375 | 376.14 | temperature | 25 | 4320 | < th | dose independent | rect. | 10 | 5 |
| 420 | 376.94 | temperature | 20 | 4320 | > th | dose independent | rect. | 8 | 23 |
| 489 | 377.73 | temperature | 25 | 4320 | < th | dose dependent | rect. | 8 | 22 |
| 513 | 378.08 | temperature | 25 | 4320 | < th | dose dependent | no | NA | NA |
| 546 | 378.48 | temperature | 20 | 4320 | > th | dose independent | no | NA | NA |
| 565 | 378.65 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 574 | 378.74 | temperature | 25 | 4320 | < th | dose dependent | rect. | 24 | 23 |
| 576 | 378.75 | temperature | 25 | 4320 | < th | dose dependent | rect. | 2 | 23 |
| 602 | 379.05 | temperature | 20 | 4320 | > th | dose dependent | sin | 22 | NA |
| 624 | 379.26 | temperature | 20 | 4320 | > th | dose independent | rect. | 5 | 23 |
| 647 | 379.50 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 656 | 379.62 | temperature | 15 | 4320 | > th | dose dependent | sin | 13 | NA |
| 659 | 379.63 | temperature | 20 | 4320 | > th | dose independent | rect. | 1 | 23 |
| 674 | 379.69 | temperature | 20 | 4320 | > th | dose independent | rect. | 3 | 23 |
| 677 | 379.69 | temperature | 15 | 4320 | > th | dose dependent | rect. | 17 | 18 |
| 725 | 379.99 | radiation | 1 | 14400 | < th | dose independent | rect. | 6 | 9 |
| 742 | 380.08 | radiation | 1 | 14400 | > th | dose independent | rect. | 6 | 9 |
| 826 | 380.48 | radiation | 1 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 881 | 380.69 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 23 |
| 939 | 380.99 | temperature | 20 | 4320 | < th | dose independent | no | NA | NA |