Os02g0795200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0795200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 340.43 | 0.867 | 3.05 | -0.024 | 0.0045 | 3.13 | -1.09 | -4.17 | 0.0234 | 23.5 | 39.39 | 4403 | -- | -- |
| 347.58 | 0.868 | 2.97 | 0.246 | 0.145 | 2.01 | 1.2 | -- | 0.0873 | 9.27 | 35.36 | 3671 | -- | -- |
| 345.53 | 0.866 | 3.05 | 0.0195 | 0.0113 | 3.13 | -- | -4.2 | 0.0289 | 23.4 | 39.67 | 4408 | -- | -- |
| 351.73 | 0.873 | 2.99 | 0.288 | 0.127 | 1.57 | -- | -- | 0.0151 | 5.94 | 35.81 | 3649 | -- | -- |
| 345.5 | 0.866 | 2.99 | 0.163 | -- | 1.6 | -- | -0.378 | 0.0259 | -- | 36.97 | 4410 | -- | -- |
| 369.8 | 0.902 | 3 | 0.474 | 0.0078 | -- | -1.04 | -- | -0.00544 | 23.6 | -- | -- | -- | -- |
| 374.2 | 0.906 | 2.99 | 0.513 | 0.0714 | -- | -- | -- | -0.00287 | 5 | -- | -- | -- | -- |
| 345.49 | 0.866 | 2.99 | 0.172 | -- | 1.43 | -- | -- | 0.0277 | -- | 39.06 | 4408 | -- | -- |
| 345.8 | 0.866 | 2.99 | -- | 0.0872 | 1.5 | -- | -- | 0.00943 | 5.16 | 36.78 | 4410 | -- | -- |
| 374.47 | 0.904 | 2.99 | 0.516 | -- | -- | -- | -- | -0.00105 | -- | -- | -- | -- | -- |
| 381.14 | 0.913 | 3 | -- | 0.0806 | -- | -- | -- | -0.06 | 4.79 | -- | -- | -- | -- |
| 346.19 | 0.867 | 2.99 | -- | -- | 1.5 | -- | -- | 0.0123 | -- | 36.93 | 4410 | -- | -- |
| 381.49 | 0.912 | 3.01 | -- | -- | -- | -- | -- | -0.0583 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 340.72 | radiation | 10 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 3 | 341.80 | humidity | 50 | 4320 | < th | dose dependent | rect. | 12 | 1 |
| 4 | 342.12 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 12 | 343.26 | humidity | 50 | 4320 | < th | dose dependent | rect. | 16 | 22 |
| 17 | 343.54 | atmosphere | 1010 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 19 | 343.63 | atmosphere | 1005 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 63 | 344.29 | radiation | 10 | 10 | < th | dose independent | rect. | 12 | 1 |
| 70 | 344.52 | humidity | 90 | 720 | < th | dose independent | rect. | 4 | 1 |
| 73 | 344.78 | humidity | 50 | 4320 | < th | dose dependent | sin | 5 | NA |
| 83 | 345.03 | radiation | 10 | 10 | < th | dose independent | rect. | 11 | 5 |
| 110 | 345.36 | humidity | 50 | 4320 | < th | dose dependent | rect. | 12 | 22 |
| 169 | 345.59 | humidity | 50 | 4320 | < th | dose dependent | no | NA | NA |
| 310 | 345.85 | atmosphere | 1010 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 331 | 345.95 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 334 | 346.12 | radiation | 10 | 90 | < th | dose independent | rect. | 10 | 7 |
| 356 | 346.43 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 21 | 5 |
| 362 | 346.46 | radiation | 10 | 270 | < th | dose dependent | rect. | 11 | 1 |
| 368 | 346.48 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 21 | 5 |
| 387 | 346.54 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 18 | 8 |
| 392 | 346.55 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 443 | 346.66 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 454 | 346.70 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 23 | 3 |
| 457 | 346.70 | atmosphere | 1010 | 4320 | > th | dose dependent | sin | 16 | NA |
| 472 | 346.74 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 23 | 3 |
| 509 | 346.78 | atmosphere | 1010 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 545 | 346.82 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 558 | 346.84 | atmosphere | 1015 | 4320 | > th | dose independent | sin | 14 | NA |
| 598 | 346.89 | atmosphere | 1015 | 4320 | < th | dose independent | sin | 13 | NA |
| 599 | 346.89 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 712 | 347.02 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 20 | 14 |
| 782 | 347.09 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 21 | 13 |
| 940 | 347.25 | humidity | 80 | 4320 | < th | dose dependent | rect. | 7 | 1 |