Os02g0794900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : C2 calcium/lipid-binding region, CaLB domain containing protein.
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Os02g0794900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : C2 calcium/lipid-binding region, CaLB domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.98 | 0.319 | 7.99 | 0.407 | 0.638 | -0.834 | -0.16 | 3.08 | 0.617 | 5.4 | 25.48 | 97 | -- | -- |
| 48.97 | 0.326 | 8.04 | 0.0858 | 0.665 | -0.561 | -0.472 | -- | 0.523 | 5.17 | 25.61 | 114 | -- | -- |
| 46.03 | 0.316 | 7.99 | 0.421 | 0.638 | -0.836 | -- | 3.24 | 0.622 | 5.35 | 25.47 | 101 | -- | -- |
| 49.57 | 0.328 | 8.04 | 0.0528 | 0.69 | -0.532 | -- | -- | 0.525 | 5.23 | 25.69 | 91 | -- | -- |
| 56.54 | 0.35 | 7.98 | 0.665 | -- | -1.37 | -- | 3.78 | 0.758 | -- | 24.55 | 257 | -- | -- |
| 54.02 | 0.345 | 8.04 | -0.0297 | 0.881 | -- | -0.274 | -- | 0.495 | 4.87 | -- | -- | -- | -- |
| 54.22 | 0.345 | 8.04 | -0.0288 | 0.879 | -- | -- | -- | 0.496 | 4.86 | -- | -- | -- | -- |
| 63.52 | 0.371 | 8.03 | 0.169 | -- | -1.05 | -- | -- | 0.611 | -- | 24.5 | 259 | -- | -- |
| 49.64 | 0.328 | 8.04 | -- | 0.689 | -0.523 | -- | -- | 0.518 | 5.2 | 25.61 | 91 | -- | -- |
| 94.98 | 0.455 | 8.05 | 0.00381 | -- | -- | -- | -- | 0.519 | -- | -- | -- | -- | -- |
| 54.24 | 0.345 | 8.04 | -- | 0.878 | -- | -- | -- | 0.499 | 4.86 | -- | -- | -- | -- |
| 64.26 | 0.373 | 8.03 | -- | -- | -1.04 | -- | -- | 0.587 | -- | 24.6 | 254 | -- | -- |
| 94.98 | 0.455 | 8.05 | -- | -- | -- | -- | -- | 0.518 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.20 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 7 | 13 |
| 6 | 45.44 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 14 | 45.62 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 16 | 45.64 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 3 | 17 |
| 58 | 45.85 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 7 | 11 |
| 84 | 45.97 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 6 |
| 94 | 45.99 | temperature | 25.0 | 270 | > th | dose dependent | sin | 2 | NA |
| 112 | 46.04 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 149 | 46.10 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 150 | 46.10 | temperature | 25.0 | 90 | > th | dose dependent | no | NA | NA |
| 204 | 46.18 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 205 | 46.18 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 6 | 5 |
| 217 | 46.21 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 230 | 46.23 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 234 | 46.23 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 2 |
| 262 | 46.28 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 279 | 46.29 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 285 | 46.30 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 11 |
| 325 | 46.35 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 7 |
| 368 | 46.40 | temperature | 20.0 | 720 | > th | dose dependent | sin | 5 | NA |
| 372 | 46.40 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 386 | 46.42 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 414 | 46.47 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 433 | 46.49 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 447 | 46.51 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 20 | NA |
| 482 | 46.55 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 517 | 46.58 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 11 |
| 538 | 46.61 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 576 | 46.66 | temperature | 30.0 | 270 | < th | dose dependent | sin | 0 | NA |
| 660 | 46.76 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 6 | 7 |
| 666 | 46.77 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 681 | 46.79 | wind | 3.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 706 | 46.82 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 4 | 15 |
| 728 | 46.85 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 8 |
| 737 | 46.86 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 8 |
| 738 | 46.86 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 11 |
| 743 | 46.86 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 8 |
| 835 | 46.93 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 839 | 46.93 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 4 | 10 |
| 851 | 46.95 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 857 | 46.95 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 882 | 46.98 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 20 | 13 |
| 918 | 47.01 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 17 |
| 929 | 47.03 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 955 | 47.05 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 4 | 11 |
| 977 | 47.07 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 20 | 19 |
| 979 | 47.08 | temperature | 25.0 | 720 | > th | dose independent | rect. | 7 | 4 |