Os02g0793500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os02g0793500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.61 | 0.386 | 8.34 | -2.12 | 0.109 | -1.4 | 2.09 | -1.01 | -0.396 | 1.03 | 24.83 | 227 | -- | -- |
| 68.64 | 0.386 | 8.37 | -2.24 | 0.125 | -1.28 | 1.91 | -- | -0.448 | 0.971 | 25.63 | 223 | -- | -- |
| 83.41 | 0.425 | 8.38 | -2.4 | 0.172 | -1.27 | -- | 0.527 | -0.482 | 2.58 | 25.82 | 189 | -- | -- |
| 83.69 | 0.426 | 8.37 | -2.35 | 0.115 | -1.29 | -- | -- | -0.446 | 1.97 | 25.27 | 233 | -- | -- |
| 84.14 | 0.427 | 8.37 | -2.36 | -- | -1.25 | -- | 0.168 | -0.44 | -- | 24.93 | 250 | -- | -- |
| 93.83 | 0.454 | 8.3 | -1.94 | 0.0426 | -- | -1.88 | -- | -0.177 | 12.8 | -- | -- | -- | -- |
| 108.41 | 0.488 | 8.31 | -2.01 | 0.105 | -- | -- | -- | -0.185 | 16.9 | -- | -- | -- | -- |
| 84.17 | 0.427 | 8.36 | -2.33 | -- | -1.27 | -- | -- | -0.429 | -- | 24.81 | 254 | -- | -- |
| 213.28 | 0.68 | 8.27 | -- | 0.117 | -0.341 | -- | -- | -0.00747 | 17.9 | 24.2 | 23 | -- | -- |
| 108.99 | 0.488 | 8.31 | -2.02 | -- | -- | -- | -- | -0.188 | -- | -- | -- | -- | -- |
| 215.11 | 0.686 | 8.26 | -- | 0.142 | -- | -- | -- | 0.0392 | 16.4 | -- | -- | -- | -- |
| 213.62 | 0.681 | 8.27 | -- | -- | -0.379 | -- | -- | -0.0338 | -- | 25.51 | 175 | -- | -- |
| 216.19 | 0.686 | 8.26 | -- | -- | -- | -- | -- | 0.0361 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.73 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 10 | 22 |
| 6 | 67.18 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 24 | 67.85 | temperature | 25.0 | 270 | < th | dose dependent | no | NA | NA |
| 179 | 71.13 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 229 | 71.78 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 21 |
| 248 | 71.94 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 254 | 72.01 | temperature | 25.0 | 270 | < th | dose dependent | sin | 10 | NA |
| 296 | 72.45 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 8 | 22 |
| 302 | 72.55 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 7 | 18 |
| 304 | 72.56 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 9 | 16 |
| 312 | 72.61 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 21 |
| 338 | 72.85 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 347 | 72.90 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 19 | 4 |
| 353 | 72.96 | wind | 5.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 379 | 73.13 | wind | 5.0 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 380 | 73.13 | temperature | 25.0 | 720 | < th | dose independent | rect. | 9 | 16 |
| 392 | 73.18 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 12 | 2 |
| 434 | 73.44 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 14 | 15 |
| 435 | 73.44 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 18 | 20 |
| 457 | 73.48 | temperature | 25.0 | 720 | < th | dose dependent | sin | 17 | NA |
| 458 | 73.48 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 466 | 73.50 | wind | 9.0 | 43200 | < th | dose independent | rect. | 14 | 17 |
| 472 | 73.51 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 480 | 73.53 | wind | 9.0 | 43200 | > th | dose independent | rect. | 14 | 17 |
| 488 | 73.54 | wind | 7.0 | 43200 | > th | dose dependent | sin | 15 | NA |
| 505 | 73.57 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 17 | 7 |
| 507 | 73.58 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 509 | 73.58 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 514 | 73.60 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 519 | 73.61 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 524 | 73.62 | wind | 7.0 | 43200 | > th | dose independent | sin | 15 | NA |
| 529 | 73.63 | wind | 7.0 | 43200 | > th | dose independent | rect. | 14 | 13 |
| 535 | 73.64 | wind | 7.0 | 43200 | < th | dose independent | sin | 15 | NA |
| 543 | 73.65 | wind | 7.0 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 546 | 73.65 | wind | 9.0 | 43200 | > th | dose independent | rect. | 12 | 20 |
| 547 | 73.65 | wind | 9.0 | 43200 | < th | dose independent | rect. | 12 | 20 |
| 556 | 73.67 | wind | 7.0 | 43200 | < th | dose independent | rect. | 14 | 13 |
| 558 | 73.68 | wind | 9.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 590 | 73.72 | wind | 7.0 | 43200 | < th | dose independent | rect. | 14 | 10 |
| 612 | 73.74 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 649 | 73.78 | humidity | 50.0 | 43200 | < th | dose dependent | sin | 3 | NA |
| 719 | 73.88 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 726 | 73.88 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 729 | 73.89 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 737 | 73.89 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 19 |
| 751 | 73.91 | temperature | 25.0 | 720 | < th | dose independent | rect. | 5 | 20 |
| 770 | 73.92 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 815 | 73.94 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 876 | 73.97 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 18 | 20 |
| 883 | 73.98 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 5 |
| 884 | 73.98 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 891 | 73.98 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 18 | 20 |
| 908 | 73.99 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 920 | 73.99 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 1 |