Os02g0790500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 20 domain containing protein.
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Os02g0790500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 20 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 93.06 | 0.453 | 11.5 | 0.428 | 1.76 | -1.21 | 0.337 | 2.82 | 0.62 | 18.4 | 26.23 | 895 | -- | -- |
| 112.7 | 0.494 | 11.6 | -0.091 | 1.58 | -1.03 | 0.152 | -- | 0.543 | 18.2 | 26.38 | 1370 | -- | -- |
| 92.5 | 0.448 | 11.5 | 0.481 | 1.76 | -1.25 | -- | 3.22 | 0.591 | 18.4 | 26.45 | 916 | -- | -- |
| 102.36 | 0.471 | 11.6 | -0.287 | 1.53 | -1.03 | -- | -- | 0.388 | 18.2 | 26.5 | 1036 | -- | -- |
| 214.6 | 0.682 | 11.5 | 0.614 | -- | -1.31 | -- | 3.29 | 0.603 | -- | 27.1 | 1285 | -- | -- |
| 128.15 | 0.531 | 11.7 | -0.605 | 1.53 | -- | 0.572 | -- | 0.0987 | 17.6 | -- | -- | -- | -- |
| 128.95 | 0.532 | 11.7 | -0.607 | 1.53 | -- | -- | -- | 0.101 | 17.5 | -- | -- | -- | -- |
| 214.04 | 0.681 | 11.6 | -0.29 | -- | -1.07 | -- | -- | 0.35 | -- | 26.5 | 1277 | -- | -- |
| 103.88 | 0.475 | 11.6 | -- | 1.62 | -1.13 | -- | -- | 0.419 | 18.3 | 26.5 | 1017 | -- | -- |
| 251.13 | 0.74 | 11.6 | -0.657 | -- | -- | -- | -- | 0.064 | -- | -- | -- | -- | -- |
| 138.67 | 0.551 | 11.6 | -- | 1.54 | -- | -- | -- | 0.169 | 17.5 | -- | -- | -- | -- |
| 216.04 | 0.685 | 11.6 | -- | -- | -1.14 | -- | -- | 0.408 | -- | 26.56 | 1279 | -- | -- |
| 262.53 | 0.756 | 11.6 | -- | -- | -- | -- | -- | 0.137 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 87.71 | temperature | 25 | 720 | > th | dose independent | rect. | 18 | 3 |
| 2 | 87.72 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 3 | 88.77 | temperature | 20 | 720 | > th | dose dependent | rect. | 18 | 3 |
| 7 | 89.77 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 9 | 89.85 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 10 |
| 36 | 91.72 | temperature | 25 | 720 | > th | dose independent | rect. | 10 | 14 |
| 53 | 92.71 | temperature | 25 | 720 | > th | dose independent | sin | 17 | NA |
| 71 | 93.35 | temperature | 25 | 720 | < th | dose independent | rect. | 15 | 9 |
| 94 | 94.16 | temperature | 25 | 720 | > th | dose dependent | sin | 13 | NA |
| 162 | 95.94 | temperature | 25 | 720 | < th | dose independent | sin | 17 | NA |
| 253 | 97.63 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 9 |
| 259 | 97.71 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 19 |
| 611 | 101.26 | temperature | 30 | 720 | < th | dose dependent | sin | 17 | NA |
| 620 | 101.35 | temperature | 25 | 720 | < th | dose independent | rect. | 5 | 19 |
| 651 | 101.66 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 11 |
| 695 | 101.91 | temperature | 25 | 10 | < th | dose dependent | sin | 11 | NA |
| 729 | 102.16 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 753 | 102.28 | temperature | 20 | 10 | > th | dose dependent | sin | 12 | NA |
| 754 | 102.29 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 917 | 103.15 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 23 |