Os02g0789400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 9G8-like SR protein (RSZp22 splicing factor).
FiT-DB / Search/ Help/ Sample detail
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Os02g0789400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 9G8-like SR protein (RSZp22 splicing factor).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13.88 | 0.175 | 12.2 | -0.215 | 0.428 | 0.495 | 0.305 | 0.396 | -0.0758 | 3.22 | 72.02 | 1213 | -- | -- |
| 14.22 | 0.176 | 12.2 | -0.182 | 0.416 | 0.504 | 0.226 | -- | -0.0606 | 3.2 | 72 | 1213 | -- | -- |
| 14.17 | 0.175 | 12.2 | -0.209 | 0.429 | 0.496 | -- | 0.311 | -0.0745 | 3.24 | 72.49 | 1211 | -- | -- |
| 14.36 | 0.177 | 12.2 | -0.163 | 0.428 | 0.511 | -- | -- | -0.0605 | 3.23 | 72.22 | 1210 | -- | -- |
| 16.54 | 0.189 | 12.2 | -0.226 | -- | 0.668 | -- | 0.505 | -0.055 | -- | 75 | 1824 | -- | -- |
| 22.92 | 0.224 | 12.2 | -0.257 | 0.337 | -- | 0.201 | -- | -0.123 | 4.14 | -- | -- | -- | -- |
| 23.03 | 0.225 | 12.2 | -0.259 | 0.339 | -- | -- | -- | -0.124 | 4.14 | -- | -- | -- | -- |
| 16.7 | 0.19 | 12.2 | -0.175 | -- | 0.668 | -- | -- | -0.0469 | -- | 74.82 | 1783 | -- | -- |
| 15.04 | 0.181 | 12.2 | -- | 0.429 | 0.529 | -- | -- | -0.0428 | 3.21 | 72.71 | 1212 | -- | -- |
| 29.25 | 0.253 | 12.2 | -0.246 | -- | -- | -- | -- | -0.115 | -- | -- | -- | -- | -- |
| 24.8 | 0.233 | 12.2 | -- | 0.334 | -- | -- | -- | -0.0955 | 4.15 | -- | -- | -- | -- |
| 17.5 | 0.195 | 12.2 | -- | -- | 0.685 | -- | -- | -0.0259 | -- | 74.7 | 1783 | -- | -- |
| 30.84 | 0.259 | 12.2 | -- | -- | -- | -- | -- | -0.0881 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.55 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 2 | 13.61 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 3 | 13.70 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 4 | 13.78 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 15 |
| 7 | 13.81 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 5 |
| 19 | 13.92 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 57 | 14.20 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 63 | 14.26 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 83 | 14.31 | humidity | 50 | 1440 | > th | dose dependent | rect. | 6 | 15 |
| 117 | 14.40 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 18 |
| 120 | 14.42 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 124 | 14.43 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 15 |
| 141 | 14.46 | wind | 3 | 43200 | < th | dose independent | rect. | 2 | 2 |
| 159 | 14.50 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 5 |
| 182 | 14.53 | humidity | 80 | 1440 | < th | dose dependent | sin | 15 | NA |
| 196 | 14.55 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 15 |
| 198 | 14.55 | humidity | 50 | 1440 | > th | dose dependent | sin | 21 | NA |
| 206 | 14.55 | humidity | 90 | 1440 | < th | dose dependent | rect. | 6 | 15 |
| 222 | 14.57 | temperature | 25 | 1440 | > th | dose dependent | sin | 20 | NA |
| 274 | 14.61 | wind | 3 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 276 | 14.61 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 9 |
| 292 | 14.61 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 13 |
| 305 | 14.62 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 6 |
| 398 | 14.68 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 4 |
| 411 | 14.69 | wind | 3 | 43200 | > th | dose independent | rect. | 2 | 5 |
| 412 | 14.69 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 5 |
| 421 | 14.69 | humidity | 70 | 1440 | > th | dose independent | rect. | 14 | 20 |
| 434 | 14.70 | humidity | 70 | 1440 | > th | dose independent | sin | 16 | NA |
| 453 | 14.71 | wind | 3 | 43200 | > th | dose independent | rect. | 2 | 11 |
| 464 | 14.71 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 22 |
| 486 | 14.72 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 549 | 14.75 | wind | 3 | 43200 | > th | dose independent | rect. | 2 | 8 |
| 566 | 14.75 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 5 |
| 588 | 14.76 | wind | 3 | 43200 | < th | dose independent | rect. | 2 | 10 |
| 615 | 14.77 | humidity | 70 | 1440 | > th | dose independent | rect. | 14 | 12 |
| 616 | 14.77 | humidity | 70 | 1440 | > th | dose independent | rect. | 14 | 14 |
| 641 | 14.78 | humidity | 70 | 1440 | > th | dose independent | rect. | 14 | 10 |
| 674 | 14.79 | humidity | 70 | 1440 | > th | dose independent | rect. | 14 | 6 |
| 752 | 14.82 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 16 |
| 778 | 14.83 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 11 |
| 839 | 14.85 | humidity | 80 | 1440 | < th | dose independent | sin | 0 | NA |
| 859 | 14.85 | wind | 1 | 43200 | > th | dose dependent | rect. | 24 | 14 |
| 860 | 14.85 | radiation | 20 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 915 | 14.87 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 916 | 14.87 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 917 | 14.87 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 943 | 14.88 | wind | 3 | 43200 | > th | dose independent | sin | 7 | NA |
| 974 | 14.88 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 23 |
| 983 | 14.89 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 989 | 14.89 | wind | 1 | 43200 | > th | dose dependent | rect. | 3 | 11 |
| 994 | 14.89 | radiation | 1 | 1440 | > th | dose dependent | rect. | 17 | 14 |