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Os02g0787800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Diacylglycerol kinase, catalytic region domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.5 (0.0156) R2 : 0.00452
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0473 (0.0328) R2dN8 : 0.00584 R2N8 : 0.00452
σ : 0.294
deviance : 39.63
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.62 0.247 10.5 -0.06 0.235 -0.405 -0.0847 -1.56 0.0565 7.74 19.67 36 -- --
29.14 0.251 10.5 0.249 0.177 -0.618 -0.369 -- 0.145 9.93 22.37 100 -- --
27.64 0.245 10.5 -0.064 0.235 -0.402 -- -1.57 0.056 7.72 19.68 35 -- --
29.25 0.252 10.5 0.195 0.178 -0.536 -- -- 0.124 8.52 23.44 89 -- --
30.01 0.255 10.5 -0.0314 -- -0.484 -- -1.35 0.0767 -- 20.05 181 -- --
33.37 0.271 10.5 0.097 0.318 -- 0.475 -- 0.0534 5.18 -- -- -- --
33.81 0.272 10.5 0.0981 0.326 -- -- -- 0.0515 5.72 -- -- -- --
29.71 0.254 10.5 0.208 -- -0.583 -- -- 0.119 -- 24.1 317 -- --
30.18 0.256 10.5 -- 0.174 -0.498 -- -- 0.0898 8.24 24 100 -- --
39.32 0.293 10.5 0.108 -- -- -- -- 0.0593 -- -- -- -- --
34.06 0.273 10.5 -- 0.327 -- -- -- 0.0406 5.7 -- -- -- --
30.78 0.258 10.5 -- -- -0.547 -- -- 0.0917 -- 24.2 313 -- --
39.63 0.294 10.5 -- -- -- -- -- 0.0473 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 26.67 temperature 20.0 10 > th dose dependent rect. 8 21
2 26.69 temperature 15.0 270 > th dose dependent rect. 9 16
12 26.86 temperature 20.0 30 > th dose dependent rect. 6 23
24 27.00 temperature 30.0 90 < th dose dependent rect. 15 8
25 27.00 temperature 30.0 90 < th dose dependent rect. 13 10
29 27.03 temperature 10.0 30 > th dose dependent rect. 23 23
90 27.43 temperature 20.0 10 > th dose dependent sin 18 NA
97 27.45 temperature 20.0 90 > th dose dependent rect. 11 17
102 27.47 temperature 20.0 30 > th dose dependent rect. 23 21
120 27.53 temperature 20.0 30 > th dose dependent rect. 21 23
126 27.57 temperature 30.0 10 < th dose dependent sin 18 NA
149 27.63 temperature 20.0 30 > th dose dependent no NA NA
154 27.64 temperature 10.0 90 > th dose dependent no NA NA
167 27.66 temperature 20.0 30 > th dose dependent rect. 13 23
175 27.68 radiation 1.0 270 < th dose dependent rect. 17 1
216 27.76 temperature 30.0 90 < th dose dependent rect. 11 23
225 27.77 temperature 20.0 30 > th dose dependent rect. 3 23
236 27.79 temperature 30.0 90 < th dose dependent rect. 1 23
246 27.81 temperature 30.0 90 < th dose dependent rect. 23 23
252 27.82 temperature 20.0 10 > th dose dependent rect. 8 12
263 27.84 temperature 20.0 10 > th dose dependent rect. 8 14
268 27.85 temperature 30.0 270 < th dose dependent rect. 17 1
278 27.86 temperature 20.0 30 > th dose dependent rect. 11 23
306 27.91 temperature 20.0 30 > th dose dependent rect. 15 23
310 27.92 temperature 20.0 30 > th dose dependent rect. 17 23
315 27.94 temperature 30.0 90 < th dose dependent no NA NA
321 27.94 temperature 30.0 90 < th dose dependent rect. 15 23
326 27.95 temperature 30.0 90 < th dose dependent rect. 13 23
330 27.96 temperature 30.0 30 < th dose dependent rect. 3 23
333 27.97 temperature 25.0 270 < th dose independent rect. 17 1
361 28.00 temperature 30.0 30 < th dose dependent rect. 9 23
362 28.01 radiation 1.0 270 < th dose independent rect. 17 1
370 28.01 temperature 30.0 30 < th dose dependent rect. 7 23
373 28.02 temperature 30.0 30 < th dose dependent rect. 17 23
405 28.06 temperature 30.0 30 < th dose dependent rect. 19 23
414 28.07 temperature 20.0 30 > th dose dependent rect. 19 23
435 28.11 temperature 20.0 10 > th dose dependent rect. 13 16
446 28.12 temperature 30.0 10 < th dose dependent rect. 12 11
447 28.12 temperature 30.0 90 < th dose dependent rect. 15 20
474 28.17 precipitation 0.1 270 > th dose independent rect. 16 2
479 28.17 radiation 1.0 270 < th dose dependent rect. 9 9
491 28.18 temperature 30.0 30 < th dose dependent rect. 21 23
635 28.35 radiation 1.0 270 < th dose dependent rect. 13 5
647 28.36 temperature 25.0 90 < th dose independent rect. 15 8
654 28.37 precipitation 0.1 270 > th dose dependent rect. 14 4
675 28.40 temperature 30.0 270 < th dose independent rect. 13 8
682 28.41 humidity 60.0 90 > th dose dependent rect. 15 8
696 28.42 temperature 30.0 90 < th dose dependent rect. 4 19
704 28.43 temperature 25.0 90 < th dose independent rect. 13 10
727 28.44 temperature 30.0 30 < th dose dependent rect. 5 23
737 28.45 temperature 10.0 270 > th dose dependent rect. 17 23
784 28.50 temperature 15.0 720 > th dose dependent rect. 6 12
792 28.51 humidity 80.0 270 > th dose dependent rect. 17 1
838 28.55 temperature 25.0 30 > th dose independent sin 19 NA
863 28.58 temperature 20.0 90 > th dose dependent rect. 11 10
987 28.67 temperature 25.0 10 < th dose independent rect. 14 8
988 28.67 temperature 25.0 10 < th dose independent rect. 12 10