Os02g0787200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UspA domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0787200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : UspA domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 168.32 | 0.61 | 6.03 | 0.305 | 0.951 | -0.77 | -1.37 | -0.482 | 0.686 | 7.5 | 14.43 | 42 | -- | -- |
| 169.18 | 0.606 | 6.02 | 0.318 | 0.948 | -0.821 | -1.67 | -- | 0.704 | 7.77 | 14.43 | 41 | -- | -- |
| 172.63 | 0.612 | 6.04 | 0.272 | 0.949 | -0.68 | -- | -0.768 | 0.678 | 6.99 | 14.65 | 41 | -- | -- |
| 176.51 | 0.619 | 6.03 | 0.262 | 0.941 | -0.707 | -- | -- | 0.686 | 7.09 | 14.6 | 41 | -- | -- |
| 209.94 | 0.675 | 6.06 | 0.308 | -- | -0.803 | -- | -0.836 | 0.708 | -- | 10.1 | 349 | -- | -- |
| 192.81 | 0.651 | 6.06 | 0.189 | 1.06 | -- | 0.0189 | -- | 0.624 | 4.56 | -- | -- | -- | -- |
| 192.81 | 0.65 | 6.06 | 0.189 | 1.06 | -- | -- | -- | 0.624 | 4.56 | -- | -- | -- | -- |
| 194.36 | 0.649 | 6.1 | 0.231 | -- | -1.24 | -- | -- | 0.684 | -- | 2.24 | 614 | -- | -- |
| 178.2 | 0.622 | 6.03 | -- | 0.942 | -0.683 | -- | -- | 0.659 | 6.96 | 14.59 | 41 | -- | -- |
| 252.44 | 0.742 | 6.06 | 0.23 | -- | -- | -- | -- | 0.652 | -- | -- | -- | -- | -- |
| 193.75 | 0.651 | 6.06 | -- | 1.06 | -- | -- | -- | 0.603 | 4.56 | -- | -- | -- | -- |
| 194.92 | 0.65 | 6.06 | -- | -- | -1.16 | -- | -- | 0.69 | -- | 2.22 | 605 | -- | -- |
| 253.84 | 0.744 | 6.07 | -- | -- | -- | -- | -- | 0.626 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 160.91 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 13 | 19 |
| 11 | 162.09 | radiation | 20.0 | 90 | < th | dose independent | rect. | 13 | 19 |
| 21 | 163.07 | radiation | 20.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 33 | 163.65 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 19 |
| 93 | 165.93 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 100 | 166.13 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 17 | 15 |
| 117 | 166.48 | wind | 1.0 | 30 | > th | dose independent | rect. | 19 | 9 |
| 118 | 166.48 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 130 | 166.76 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 132 | 166.79 | radiation | 20.0 | 30 | < th | dose independent | rect. | 17 | 15 |
| 134 | 166.80 | radiation | 1.0 | 270 | > th | dose independent | rect. | 18 | 20 |
| 135 | 166.82 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 136 | 166.82 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 137 | 166.82 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 138 | 166.82 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 142 | 166.85 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 8 |
| 144 | 166.85 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 147 | 166.91 | humidity | 50.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 149 | 166.92 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 152 | 166.95 | radiation | 1.0 | 30 | > th | dose independent | rect. | 8 | 9 |
| 177 | 167.07 | wind | 1.0 | 30 | > th | dose independent | rect. | 8 | 20 |
| 188 | 167.33 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 213 | 167.63 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 17 | 15 |
| 221 | 167.73 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 8 | 7 |
| 227 | 167.77 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 8 | 7 |
| 229 | 167.78 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 8 | 9 |
| 234 | 167.85 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 17 | 15 |
| 239 | 167.91 | wind | 9.0 | 30 | < th | dose dependent | rect. | 8 | 9 |
| 241 | 167.92 | humidity | 50.0 | 30 | > th | dose independent | rect. | 15 | 17 |
| 253 | 168.03 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 6 | 7 |
| 255 | 168.05 | radiation | 1.0 | 270 | > th | dose independent | sin | 3 | NA |
| 269 | 168.16 | wind | 1.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 270 | 168.16 | wind | 9.0 | 30 | < th | dose independent | rect. | 8 | 9 |
| 274 | 168.19 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 15 | 17 |
| 279 | 168.24 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 15 | 17 |
| 295 | 168.33 | temperature | 10.0 | 10 | > th | dose independent | rect. | 8 | 9 |
| 297 | 168.33 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 8 | 9 |
| 298 | 168.33 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 9 |
| 299 | 168.33 | temperature | 10.0 | 10 | > th | dose independent | rect. | 17 | 15 |
| 300 | 168.33 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 9 |
| 328 | 168.39 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 1 | 7 |
| 341 | 168.47 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 15 | 17 |
| 346 | 168.52 | temperature | 20.0 | 10 | > th | dose independent | rect. | 8 | 7 |
| 354 | 168.64 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 7 |
| 355 | 168.66 | wind | 9.0 | 30 | < th | dose independent | rect. | 17 | 15 |
| 357 | 168.67 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 19 | 9 |
| 360 | 168.67 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 19 | 9 |
| 366 | 168.73 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 17 | 15 |
| 371 | 168.75 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 374 | 168.76 | humidity | 50.0 | 10 | > th | dose independent | rect. | 17 | 15 |
| 376 | 168.76 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 19 |
| 378 | 168.76 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 380 | 168.78 | wind | 7.0 | 30 | < th | dose independent | rect. | 19 | 9 |
| 393 | 168.80 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 394 | 168.84 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 15 |
| 400 | 168.92 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 401 | 168.92 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 404 | 168.93 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 7 |
| 405 | 168.93 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 9 |
| 408 | 168.93 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 9 |
| 412 | 168.93 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 20 | 9 |
| 418 | 168.93 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 20 | 9 |
| 419 | 168.93 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 20 | 9 |
| 431 | 168.93 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 15 |
| 434 | 168.93 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 7 |
| 447 | 169.02 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 450 | 169.03 | temperature | 10.0 | 10 | > th | dose independent | rect. | 8 | 7 |
| 453 | 169.03 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 8 | 7 |
| 454 | 169.03 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 7 |
| 455 | 169.03 | temperature | 10.0 | 10 | > th | dose independent | rect. | 15 | 17 |
| 457 | 169.03 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 7 |
| 461 | 169.04 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 8 | 9 |
| 469 | 169.07 | temperature | 10.0 | 30 | > th | dose independent | rect. | 19 | 9 |
| 470 | 169.07 | temperature | 30.0 | 30 | < th | dose independent | rect. | 19 | 9 |
| 471 | 169.07 | humidity | 50.0 | 30 | > th | dose independent | rect. | 19 | 9 |
| 473 | 169.07 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 19 | 9 |
| 474 | 169.07 | radiation | 1.0 | 30 | < th | dose independent | rect. | 19 | 9 |
| 479 | 169.07 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 15 |
| 481 | 169.07 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 15 |
| 482 | 169.07 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 15 |
| 484 | 169.07 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 19 | 9 |
| 488 | 169.07 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 15 |
| 499 | 169.12 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 510 | 169.15 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 7 |
| 513 | 169.15 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 16 | 17 |
| 522 | 169.20 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 529 | 169.25 | humidity | 80.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 530 | 169.25 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 545 | 169.33 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 8 |
| 555 | 169.38 | wind | 1.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 586 | 169.49 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 588 | 169.49 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 589 | 169.49 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 592 | 169.49 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 594 | 169.49 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 597 | 169.49 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 600 | 169.50 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 643 | 169.63 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 16 |
| 644 | 169.63 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 16 |
| 673 | 169.69 | temperature | 15.0 | 10 | > th | dose independent | rect. | 8 | 18 |
| 707 | 169.76 | wind | 9.0 | 30 | < th | dose independent | rect. | 4 | 15 |
| 708 | 169.76 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 711 | 169.77 | humidity | 90.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 741 | 169.87 | wind | 1.0 | 10 | > th | dose independent | rect. | 4 | 15 |
| 743 | 169.87 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 5 | 1 |
| 754 | 169.90 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 22 | 9 |
| 764 | 169.93 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 23 |
| 766 | 169.93 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 769 | 169.95 | humidity | 70.0 | 270 | > th | dose independent | rect. | 24 | 8 |
| 792 | 170.02 | wind | 1.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 794 | 170.04 | radiation | 1.0 | 270 | < th | dose independent | sin | 5 | NA |
| 800 | 170.05 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 15 |
| 829 | 170.13 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 5 |
| 831 | 170.13 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 843 | 170.17 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 2 | 6 |
| 856 | 170.21 | radiation | 40.0 | 270 | < th | dose independent | rect. | 1 | 15 |
| 875 | 170.25 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 896 | 170.28 | humidity | 70.0 | 30 | > th | dose independent | rect. | 14 | 18 |
| 924 | 170.36 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 9 |
| 927 | 170.36 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 18 | 15 |
| 930 | 170.36 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 18 | 15 |