Os02g0787000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Allergen V5/Tpx-1 related family protein.
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Os02g0787000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Allergen V5/Tpx-1 related family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 86.82 | 0.438 | 3.57 | 0.78 | 0.336 | -1.05 | 0.466 | 0.755 | -0.0155 | 7.82 | 22.19 | 731 | -- | -- |
| 88.57 | 0.438 | 3.59 | 0.583 | 0.364 | -1.07 | 0.165 | -- | -0.0638 | 7.55 | 22.03 | 763 | -- | -- |
| 87.37 | 0.435 | 3.57 | 0.781 | 0.335 | -1.06 | -- | 0.68 | -0.0119 | 7.9 | 22.14 | 735 | -- | -- |
| 88.48 | 0.438 | 3.59 | 0.558 | 0.337 | -1.07 | -- | -- | -0.0712 | 7.92 | 22 | 755 | -- | -- |
| 93.25 | 0.45 | 3.58 | 0.771 | -- | -1.12 | -- | 0.6 | 0.000777 | -- | 22.12 | 735 | -- | -- |
| 136.34 | 0.547 | 3.67 | 0.205 | 0.535 | -- | 0.0276 | -- | -0.418 | 8.66 | -- | -- | -- | -- |
| 136.34 | 0.547 | 3.67 | 0.206 | 0.535 | -- | -- | -- | -0.418 | 8.67 | -- | -- | -- | -- |
| 94.17 | 0.452 | 3.6 | 0.598 | -- | -1.15 | -- | -- | -0.0499 | -- | 21.97 | 737 | -- | -- |
| 95.96 | 0.456 | 3.62 | -- | 0.362 | -0.931 | -- | -- | -0.162 | 8.03 | 22.27 | 734 | -- | -- |
| 152.48 | 0.577 | 3.68 | 0.208 | -- | -- | -- | -- | -0.414 | -- | -- | -- | -- | -- |
| 137.47 | 0.548 | 3.67 | -- | 0.535 | -- | -- | -- | -0.441 | 8.64 | -- | -- | -- | -- |
| 102.75 | 0.472 | 3.62 | -- | -- | -1.02 | -- | -- | -0.141 | -- | 22.1 | 707 | -- | -- |
| 153.62 | 0.579 | 3.69 | -- | -- | -- | -- | -- | -0.437 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 87.97 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 21 |
| 22 | 88.64 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 22 |
| 36 | 88.86 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 42 | 89.06 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 52 | 89.31 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 64 | 89.65 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 73 | 89.89 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 82 | 90.13 | temperature | 25 | 720 | < th | dose dependent | sin | 11 | NA |
| 101 | 90.78 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 113 | 91.06 | temperature | 15 | 720 | > th | dose dependent | sin | 9 | NA |
| 138 | 91.60 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 276 | 93.71 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 289 | 93.84 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 340 | 94.44 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 390 | 94.76 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 393 | 94.78 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 560 | 95.54 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 589 | 95.65 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 612 | 95.74 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 696 | 96.02 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 825 | 96.43 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 851 | 96.51 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 5 |
| 897 | 96.62 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 909 | 96.65 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 930 | 96.71 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 937 | 96.73 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 987 | 96.83 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 1 |