Os02g0786200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os02g0786200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.68 | 0.277 | 12 | -0.588 | 0.812 | -0.765 | -0.441 | -0.316 | -0.102 | 7.63 | 23.87 | 36 | -- | -- |
| 34.73 | 0.274 | 12 | -0.545 | 0.81 | -0.804 | -0.459 | -- | -0.0911 | 7.69 | 23.85 | 37 | -- | -- |
| 35.19 | 0.276 | 12 | -0.598 | 0.821 | -0.733 | -- | -0.307 | -0.0975 | 7.52 | 23.44 | 37 | -- | -- |
| 35.25 | 0.277 | 12 | -0.554 | 0.819 | -0.761 | -- | -- | -0.0845 | 7.54 | 23.47 | 37 | -- | -- |
| 55.83 | 0.348 | 12 | -0.175 | -- | -1.26 | -- | 1.73 | 0.0275 | -- | 23.73 | 378 | -- | -- |
| 44.32 | 0.312 | 12.1 | -0.693 | 0.982 | -- | -0.012 | -- | -0.188 | 6.44 | -- | -- | -- | -- |
| 44.32 | 0.312 | 12.1 | -0.693 | 0.982 | -- | -- | -- | -0.188 | 6.44 | -- | -- | -- | -- |
| 56.96 | 0.352 | 12 | -0.477 | -- | -1.13 | -- | -- | -0.0551 | -- | 24.1 | 356 | -- | -- |
| 42.52 | 0.304 | 12 | -- | 0.782 | -0.898 | -- | -- | 0.0167 | 7.77 | 21.89 | 80 | -- | -- |
| 94.41 | 0.454 | 12.1 | -0.668 | -- | -- | -- | -- | -0.167 | -- | -- | -- | -- | -- |
| 57 | 0.353 | 12 | -- | 0.972 | -- | -- | -- | -0.111 | 6.48 | -- | -- | -- | -- |
| 61.8 | 0.366 | 12 | -- | -- | -1.36 | -- | -- | 0.0978 | -- | 18.6 | 405 | -- | -- |
| 106.19 | 0.481 | 12.1 | -- | -- | -- | -- | -- | -0.0932 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.29 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 2 | 30.32 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 4 |
| 16 | 30.66 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 8 |
| 30 | 30.87 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 47 | 31.00 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 6 |
| 98 | 31.47 | temperature | 20 | 720 | > th | dose independent | rect. | 22 | 11 |
| 142 | 31.76 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 161 | 31.84 | temperature | 10 | 720 | > th | dose dependent | sin | 7 | NA |
| 208 | 32.07 | temperature | 20 | 270 | > th | dose dependent | sin | 4 | NA |
| 351 | 32.87 | temperature | 20 | 720 | < th | dose independent | sin | 8 | NA |
| 361 | 32.90 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 18 |
| 417 | 33.18 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 12 |
| 464 | 33.35 | temperature | 20 | 720 | > th | dose independent | sin | 7 | NA |
| 465 | 33.35 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 5 |
| 498 | 33.44 | temperature | 20 | 720 | > th | dose independent | rect. | 22 | 19 |
| 532 | 33.54 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 4 |
| 723 | 34.15 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 6 |
| 872 | 34.52 | temperature | 25 | 30 | > th | dose dependent | rect. | 15 | 23 |