Os02g0785800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ribosomal protein L35A.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0785800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Ribosomal protein L35A.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.28 | 0.336 | 13.9 | 0.205 | 0.491 | 1.57 | 0.414 | -0.548 | 0.0299 | 21.9 | 18.06 | 100 | -- | -- |
| 51.53 | 0.334 | 13.9 | 0.296 | 0.5 | 1.57 | 0.517 | -- | 0.058 | 21.9 | 18 | 92 | -- | -- |
| 51.87 | 0.335 | 13.9 | 0.142 | 0.487 | 1.59 | -- | -0.812 | 0.0161 | 22 | 18 | 100 | -- | -- |
| 52.47 | 0.337 | 13.9 | 0.278 | 0.488 | 1.58 | -- | -- | 0.0542 | 22 | 17.9 | 100 | -- | -- |
| 58.22 | 0.355 | 13.8 | 0.0834 | -- | 1.61 | -- | -0.774 | 0.0342 | -- | 16.9 | 354 | -- | -- |
| 84.86 | 0.432 | 13.8 | 0.649 | 0.647 | -- | 0.782 | -- | 0.31 | 18.5 | -- | -- | -- | -- |
| 86.37 | 0.435 | 13.8 | 0.639 | 0.651 | -- | -- | -- | 0.312 | 18.4 | -- | -- | -- | -- |
| 58.44 | 0.356 | 13.8 | 0.26 | -- | 1.62 | -- | -- | 0.0484 | -- | 16.88 | 362 | -- | -- |
| 54.25 | 0.343 | 13.9 | -- | 0.473 | 1.78 | -- | -- | 0.00927 | 22.3 | 16.58 | 113 | -- | -- |
| 108.35 | 0.486 | 13.8 | 0.622 | -- | -- | -- | -- | 0.299 | -- | -- | -- | -- | -- |
| 97.12 | 0.461 | 13.8 | -- | 0.642 | -- | -- | -- | 0.241 | 18.4 | -- | -- | -- | -- |
| 60.02 | 0.361 | 13.8 | -- | -- | 1.78 | -- | -- | 0.0113 | -- | 15.93 | 363 | -- | -- |
| 118.54 | 0.508 | 13.8 | -- | -- | -- | -- | -- | 0.23 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.92 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 5 | 49.73 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 23 |
| 10 | 50.41 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 11 | 50.44 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 24 | 51.18 | temperature | 20 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 30 | 51.31 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 35 | 51.75 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 37 | 51.81 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 50 | 52.25 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 57 | 52.47 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 66 | 52.59 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 85 | 52.86 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 86 | 52.87 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 16 |
| 88 | 52.90 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 89 | 52.91 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 95 | 52.94 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 6 |
| 103 | 52.99 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 9 |
| 109 | 53.00 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 113 | 53.03 | temperature | 20 | 4320 | < th | dose independent | rect. | 16 | 9 |
| 156 | 53.18 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 207 | 53.33 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 239 | 53.43 | temperature | 20 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 254 | 53.49 | temperature | 20 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 259 | 53.51 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 12 |
| 306 | 53.63 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 321 | 53.67 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 14 |
| 329 | 53.69 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 330 | 53.69 | temperature | 20 | 4320 | > th | dose independent | sin | 16 | NA |
| 377 | 53.77 | temperature | 20 | 4320 | < th | dose independent | sin | 16 | NA |
| 441 | 53.91 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 528 | 54.02 | temperature | 15 | 1440 | > th | dose dependent | rect. | 19 | 15 |
| 635 | 54.14 | temperature | 15 | 1440 | > th | dose dependent | rect. | 19 | 10 |
| 706 | 54.20 | temperature | 15 | 1440 | > th | dose dependent | sin | 10 | NA |
| 789 | 54.27 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 6 |