Os02g0784400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0784400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.5 | 0.313 | 2.88 | 0.0786 | 0.0794 | -3.09 | 0.00916 | 14.4 | 0.0464 | 9.85 | 0.5004 | 77 | -- | -- |
| 44.88 | 0.312 | 2.9 | 0.000789 | 0.077 | 0.478 | 0.0455 | -- | 0.0434 | 9.93 | 0.0532 | 21 | -- | -- |
| 44.34 | 0.31 | 2.89 | 0.0461 | 0.0819 | -3.13 | -- | 15 | 0.0457 | 9.82 | 1.493 | 48 | -- | -- |
| 44.34 | 0.31 | 2.9 | 0.0116 | 0.081 | 1.06 | -- | -- | 0.0459 | 9.84 | 0.9792 | 21 | -- | -- |
| 44.74 | 0.312 | 2.89 | 0.0449 | -- | -3.23 | -- | 15.3 | 0.0456 | -- | 1.487 | 47 | -- | -- |
| 45.46 | 0.316 | 2.9 | 0.0224 | 0.0729 | -- | -0.0127 | -- | 0.0438 | 9.96 | -- | -- | -- | -- |
| 45.46 | 0.316 | 2.9 | 0.0219 | 0.0729 | -- | -- | -- | 0.0438 | 10.1 | -- | -- | -- | -- |
| 44.73 | 0.312 | 2.9 | 0.011 | -- | 1.03 | -- | -- | 0.0462 | -- | 0.9804 | 27 | -- | -- |
| 44.34 | 0.31 | 2.9 | -- | 0.0813 | 1.06 | -- | -- | 0.0445 | 9.82 | 0.9788 | 23 | -- | -- |
| 45.78 | 0.316 | 2.9 | 0.021 | -- | -- | -- | -- | 0.0438 | -- | -- | -- | -- | -- |
| 45.48 | 0.315 | 2.9 | -- | 0.0728 | -- | -- | -- | 0.0414 | 10.1 | -- | -- | -- | -- |
| 44.74 | 0.312 | 2.9 | -- | -- | 1.03 | -- | -- | 0.0445 | -- | 0.9824 | 28 | -- | -- |
| 45.8 | 0.316 | 2.9 | -- | -- | -- | -- | -- | 0.0414 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.26 | temperature | 25.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 4 | 34.42 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 6 | 34.63 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 9 | 35.30 | wind | 1.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 10 | 35.73 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 11 | 36.73 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 27 | 37.71 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 31 | 37.72 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 33 | 37.72 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 36 | 37.72 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 40 | 37.72 | humidity | 80.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 41 | 37.72 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 50 | 37.72 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 51 | 37.72 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 52 | 37.72 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 61 | 37.72 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 64 | 37.73 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 65 | 37.73 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 1 |
| 67 | 37.73 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 68 | 37.73 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 70 | 37.74 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 72 | 37.74 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 73 | 37.74 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 76 | 37.74 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 78 | 37.74 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 80 | 37.74 | radiation | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 85 | 37.74 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 92 | 37.78 | wind | 9.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 95 | 37.79 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 102 | 37.85 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 104 | 37.86 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 139 | 38.02 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 162 | 38.74 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 177 | 39.32 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 178 | 39.40 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 182 | 39.55 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 23 |
| 183 | 39.55 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 185 | 39.59 | temperature | 30.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 214 | 41.30 | humidity | 50.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 357 | 42.80 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 361 | 42.84 | wind | 1.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 486 | 43.39 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 1 | 1 |
| 549 | 43.63 | wind | 9.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 743 | 43.90 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 878 | 44.03 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 895 | 44.05 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 904 | 44.07 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 15 | 14 |
| 911 | 44.07 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 15 | 14 |
| 914 | 44.08 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 10 |
| 922 | 44.09 | radiation | 1.0 | 10 | < th | dose independent | sin | 4 | NA |
| 959 | 44.11 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 963 | 44.12 | radiation | 1.0 | 30 | < th | dose dependent | sin | 5 | NA |