Os02g0782900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0782900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 149.26 | 0.574 | 2.9 | -0.293 | 0.323 | -0.468 | -0.966 | 1.31 | 0.0271 | 20.8 | 14.86 | 816 | -- | -- |
| 150.8 | 0.572 | 2.91 | -0.348 | 0.26 | -0.406 | -0.445 | -- | -0.00156 | 20.9 | 27.41 | 749 | -- | -- |
| 152.02 | 0.574 | 2.89 | -0.221 | 0.316 | -0.451 | -- | 1.17 | 0.0322 | 20.4 | 14.45 | 775 | -- | -- |
| 151.18 | 0.573 | 2.91 | -0.365 | 0.276 | -0.409 | -- | -- | -0.00189 | 20.6 | 37.21 | 775 | -- | -- |
| 153.56 | 0.577 | 2.89 | -0.224 | -- | -0.33 | -- | 1.01 | 0.0309 | -- | 11.69 | 1697 | -- | -- |
| 154.16 | 0.582 | 2.92 | -0.413 | 0.139 | -- | -0.615 | -- | -0.076 | 0.867 | -- | -- | -- | -- |
| 155.74 | 0.584 | 2.92 | -0.39 | 0.142 | -- | -- | -- | -0.0731 | 1.28 | -- | -- | -- | -- |
| 153.66 | 0.577 | 2.9 | -0.367 | -- | -0.38 | -- | -- | -0.0295 | -- | 48.08 | 994 | -- | -- |
| 154.02 | 0.578 | 2.89 | -- | 0.273 | -0.42 | -- | -- | 0.0679 | 20.6 | 40.02 | 881 | -- | -- |
| 156.99 | 0.585 | 2.91 | -0.385 | -- | -- | -- | -- | -0.0701 | -- | -- | -- | -- | -- |
| 159.76 | 0.591 | 2.91 | -- | 0.135 | -- | -- | -- | -0.0296 | 1.17 | -- | -- | -- | -- |
| 156.67 | 0.583 | 2.89 | -- | -- | -0.298 | -- | -- | 0.0483 | -- | 42.72 | 1453 | -- | -- |
| 160.89 | 0.592 | 2.9 | -- | -- | -- | -- | -- | -0.0274 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 138.45 | radiation | 1.0 | 90 | < th | dose independent | rect. | 8 | 3 |
| 2 | 138.45 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 8 | 3 |
| 11 | 143.31 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 1 |
| 15 | 143.31 | wind | 1.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 16 | 143.31 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 20 | 143.37 | wind | 1.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 24 | 143.48 | wind | 9.0 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 28 | 143.48 | wind | 9.0 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 48 | 143.87 | wind | 9.0 | 270 | > th | dose independent | rect. | 22 | 4 |
| 56 | 143.87 | wind | 9.0 | 270 | > th | dose dependent | rect. | 22 | 4 |
| 139 | 145.76 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 3 | 5 |
| 140 | 145.81 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 3 | 5 |
| 142 | 145.92 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 173 | 146.04 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 19 | 1 |
| 175 | 146.07 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 186 | 146.15 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 197 | 146.15 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 219 | 146.24 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 220 | 146.25 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 231 | 146.29 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 235 | 146.30 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 236 | 146.30 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 246 | 146.31 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 22 | 10 |
| 251 | 146.32 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 22 | 10 |
| 253 | 146.33 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 271 | 146.44 | wind | 9.0 | 90 | > th | dose independent | rect. | 13 | 2 |
| 299 | 146.50 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 22 | 11 |
| 305 | 146.52 | wind | 9.0 | 90 | > th | dose dependent | rect. | 13 | 2 |
| 340 | 146.66 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 22 | 2 |
| 375 | 146.74 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 3 | 4 |
| 451 | 146.90 | humidity | 80.0 | 14400 | > th | dose dependent | sin | 9 | NA |
| 496 | 146.99 | humidity | 90.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 509 | 147.02 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 2 |
| 528 | 147.06 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 529 | 147.06 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 22 | 2 |
| 550 | 147.12 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 11 |
| 595 | 147.25 | wind | 7.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 768 | 147.52 | humidity | 90.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 919 | 147.72 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 968 | 147.78 | wind | 1.0 | 10 | < th | dose independent | rect. | 3 | 6 |