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Os02g0782300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Heat shock-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.7 (0.0264) R2 : 0.628
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.41 (0.0895) R2dC : 0.354 R2C : -0.395
β3 : 2.2 (0.0851) R2dE : 0.959 R2E : 0.198
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.412 (0.0555) R2dN8 : 0.0608 R2N8 : 0.0528
σ : 0.495
deviance : 112.88
__
_____
C
peak time of C : 7.35
E
wheather : temperature
threshold : -7.282
memory length : 218
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 15
open length of G : 12.1

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
98.31 0.466 12.8 -0.76 1.11 1.8 -0.163 -3.59 0.25 4.7 13.28 173 15.6 12.5
113.92 0.497 12.8 -0.388 1.03 1.49 -0.583 -- 0.37 4.17 10.8 143 15.9 12.6
98.01 0.461 12.8 -0.725 1.14 1.84 -- -3.27 0.27 4.93 12.42 172 15.6 12.3
109.73 0.488 12.7 -0.4 1.42 2.24 -- -- 0.373 7.23 -3.927 213 15.1 12.1
120.55 0.511 12.9 -0.778 -- 1.98 -- -3.03 0.154 -- 8.81 489 14.9 13.8
136.3 0.547 12.8 -0.264 1.52 -- -1.29 -- 0.401 1.35 -- -- -- --
143.04 0.56 12.8 -0.22 1.52 -- -- -- 0.407 1.42 -- -- -- --
130.2 0.531 12.8 -0.365 -- 1.89 -- -- 0.307 -- -0.3593 498 14.6 14.1
112.88 0.495 12.7 -- 1.41 2.2 -- -- 0.412 7.35 -7.282 218 15 12.1
285.75 0.79 12.8 -0.16 -- -- -- -- 0.44 -- -- -- -- --
144.31 0.562 12.8 -- 1.52 -- -- -- 0.432 1.41 -- -- -- --
133.61 0.538 12.8 -- -- 1.86 -- -- 0.354 -- -1.411 503 14.6 14
286.42 0.79 12.8 -- -- -- -- -- 0.457 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 101.91 temperature 15.0 90 > th dose dependent rect. 16 13
6 103.61 temperature 20.0 30 > th dose independent rect. 16 20
20 105.37 radiation 40.0 720 < th dose independent rect. 15 4
24 105.66 temperature 15.0 10 > th dose dependent rect. 16 20
27 105.86 precipitation 0.1 720 < th dose independent rect. 19 20
28 105.86 precipitation 0.1 720 < th dose dependent rect. 19 20
43 106.96 temperature 20.0 90 > th dose independent rect. 16 13
61 107.65 precipitation 0.1 720 < th dose independent rect. 3 4
62 107.65 precipitation 0.1 720 < th dose dependent rect. 3 4
64 107.81 wind 7.0 720 < th dose independent rect. 3 4
69 108.20 temperature 10.0 720 > th dose independent rect. 15 4
70 108.20 atmosphere 1015.0 720 < th dose independent rect. 15 4
71 108.20 temperature 10.0 720 > th dose independent rect. 19 20
85 108.43 temperature 10.0 720 > th dose independent rect. 3 4
86 108.43 temperature 30.0 720 < th dose independent rect. 3 4
87 108.43 humidity 50.0 720 > th dose independent rect. 3 4
89 108.43 atmosphere 995.0 720 > th dose independent rect. 3 4
90 108.43 radiation 30.0 720 < th dose independent rect. 3 4
92 108.43 temperature 10.0 720 > th dose independent rect. 7 20
95 108.46 radiation 40.0 270 < th dose independent rect. 14 13
96 108.54 wind 9.0 720 < th dose independent rect. 19 20
131 109.84 precipitation 0.1 270 < th dose independent rect. 19 12
132 109.84 precipitation 0.1 270 < th dose dependent rect. 19 12
133 109.85 atmosphere 1015.0 270 < th dose independent rect. 23 11
159 110.51 precipitation 0.1 720 < th dose independent rect. 12 10
160 110.51 precipitation 0.1 720 < th dose dependent rect. 12 10
162 110.55 atmosphere 1015.0 720 < th dose independent rect. 7 20
167 110.76 precipitation 0.1 270 < th dose independent rect. 10 13
168 110.76 precipitation 0.1 270 < th dose dependent rect. 10 13
171 110.90 precipitation 0.1 720 < th dose independent rect. 18 6
172 110.90 precipitation 0.1 720 < th dose dependent rect. 18 6
175 111.08 precipitation 0.1 720 < th dose independent rect. 3 20
177 111.08 precipitation 0.1 720 < th dose dependent rect. 3 20
178 111.10 atmosphere 1015.0 720 < th dose independent rect. 3 4
179 111.12 temperature 20.0 30 > th dose independent rect. 24 12
182 111.18 wind 1.0 720 > th dose independent rect. 15 4
184 111.22 wind 1.0 270 > th dose independent rect. 11 13
187 111.26 precipitation 0.1 720 < th dose independent rect. 12 19
189 111.26 precipitation 0.1 720 < th dose dependent rect. 12 19
190 111.30 precipitation 0.1 720 < th dose independent rect. 3 12
191 111.30 precipitation 0.1 720 < th dose dependent rect. 3 12
192 111.38 radiation 40.0 720 < th dose dependent rect. 3 4
193 111.40 atmosphere 1015.0 270 < th dose independent rect. 14 13
194 111.40 temperature 30.0 90 < th dose dependent rect. 19 14
197 111.46 temperature 10.0 720 > th dose independent rect. 3 12
198 111.46 temperature 10.0 720 > th dose independent rect. 15 12
211 111.60 precipitation 0.1 720 < th dose independent rect. 11 4
212 111.60 precipitation 0.1 720 < th dose dependent rect. 11 4
214 111.64 temperature 15.0 270 > th dose independent rect. 23 11
215 111.64 temperature 10.0 10 > th dose dependent rect. 24 12
218 111.76 wind 1.0 720 > th dose independent rect. 11 4
221 111.79 atmosphere 995.0 270 > th dose independent rect. 3 11
222 111.79 atmosphere 1015.0 270 < th dose independent rect. 3 11
224 111.81 temperature 20.0 10 > th dose independent rect. 2 10
227 111.82 temperature 10.0 10 > th dose dependent rect. 2 10
229 111.86 temperature 10.0 720 > th dose dependent rect. 15 4
234 111.93 radiation 40.0 270 < th dose dependent rect. 19 12
235 111.95 atmosphere 1015.0 720 < th dose independent rect. 22 14
237 111.99 radiation 1.0 720 < th dose dependent rect. 18 6
238 112.01 temperature 10.0 720 > th dose independent rect. 12 10
239 112.01 temperature 10.0 720 > th dose independent rect. 22 14
240 112.01 atmosphere 995.0 720 > th dose independent rect. 22 14
245 112.04 atmosphere 1015.0 720 < th dose independent rect. 23 4
246 112.05 radiation 10.0 720 < th dose independent rect. 17 1
250 112.11 wind 9.0 720 < th dose independent rect. 24 10
254 112.13 wind 9.0 720 < th dose independent rect. 15 4
257 112.14 temperature 10.0 90 > th dose dependent sin 11 NA
260 112.16 atmosphere 995.0 720 > th dose independent rect. 24 10
261 112.16 temperature 10.0 720 > th dose independent rect. 10 14
262 112.17 atmosphere 995.0 720 > th dose independent rect. 15 4
263 112.18 atmosphere 995.0 720 > th dose independent rect. 15 12
264 112.18 atmosphere 995.0 720 > th dose independent rect. 19 20
267 112.22 temperature 10.0 720 > th dose independent rect. 11 4
268 112.22 atmosphere 1015.0 720 < th dose independent rect. 11 4
269 112.22 wind 9.0 270 < th dose independent rect. 10 13
270 112.22 temperature 10.0 720 > th dose independent rect. 15 20
272 112.26 humidity 50.0 720 > th dose independent rect. 24 10
274 112.30 wind 9.0 720 < th dose independent rect. 3 12
276 112.32 wind 1.0 720 > th dose independent rect. 18 6
277 112.33 radiation 10.0 720 < th dose independent rect. 17 10
279 112.38 wind 9.0 720 < th dose independent rect. 11 4
292 112.51 wind 9.0 10 < th dose independent rect. 12 14
299 112.54 wind 9.0 270 < th dose independent rect. 19 12
303 112.57 radiation 30.0 270 < th dose independent rect. 19 12
304 112.58 temperature 10.0 270 > th dose independent rect. 7 12
305 112.58 temperature 10.0 270 > th dose independent rect. 19 12
306 112.58 temperature 30.0 270 < th dose independent rect. 19 12
307 112.58 humidity 50.0 270 > th dose independent rect. 19 12
308 112.58 atmosphere 995.0 270 > th dose independent rect. 19 12
309 112.58 atmosphere 1015.0 270 < th dose independent rect. 7 12
311 112.59 temperature 10.0 720 > th dose independent rect. 23 4
312 112.59 temperature 30.0 720 < th dose independent rect. 23 4
313 112.59 humidity 50.0 720 > th dose independent rect. 23 4
316 112.59 atmosphere 995.0 720 > th dose independent rect. 23 4
317 112.59 radiation 1.0 720 < th dose independent rect. 23 4
322 112.59 temperature 10.0 720 > th dose independent rect. 3 20
323 112.59 radiation 1.0 720 < th dose dependent rect. 23 4
328 112.60 precipitation 0.1 720 < th dose independent rect. 15 4
329 112.60 precipitation 0.1 720 < th dose dependent rect. 15 4
330 112.62 wind 9.0 720 < th dose independent rect. 23 4
347 112.78 wind 1.0 270 > th dose independent rect. 3 12
356 112.85 precipitation 0.1 270 < th dose independent rect. 7 12
357 112.85 precipitation 0.1 270 < th dose dependent rect. 7 12
358 112.85 temperature 20.0 270 > th dose dependent rect. 15 17
364 112.87 temperature 30.0 90 < th dose dependent rect. 21 12
384 113.00 precipitation 0.1 720 < th dose independent rect. 23 4
385 113.00 precipitation 0.1 720 < th dose dependent rect. 23 4
386 113.01 wind 9.0 720 < th dose independent rect. 22 14
388 113.03 wind 9.0 10 < th dose independent rect. 2 10
394 113.10 wind 9.0 720 < th dose independent rect. 12 10
400 113.15 precipitation 0.1 10 < th dose independent rect. 12 14
401 113.15 precipitation 0.1 10 < th dose dependent rect. 12 14
403 113.16 precipitation 0.1 720 < th dose independent rect. 7 5
404 113.16 precipitation 0.1 720 < th dose dependent rect. 7 5
410 113.19 temperature 10.0 270 > th dose dependent rect. 23 11
413 113.21 wind 1.0 270 > th dose independent rect. 19 12
414 113.21 atmosphere 1015.0 720 < th dose independent rect. 15 20
423 113.32 humidity 50.0 270 > th dose independent rect. 3 11
428 113.35 wind 1.0 30 > th dose independent rect. 12 14
434 113.41 atmosphere 1010.0 10 < th dose independent rect. 16 20
441 113.45 wind 9.0 720 < th dose independent rect. 19 5
442 113.45 temperature 15.0 720 > th dose independent rect. 7 5
447 113.48 atmosphere 995.0 270 > th dose independent rect. 7 12
450 113.53 atmosphere 995.0 720 > th dose independent rect. 7 5
451 113.53 atmosphere 1015.0 720 < th dose independent rect. 7 5
453 113.53 temperature 10.0 720 > th dose independent rect. 12 19
467 113.67 wind 9.0 10 < th dose independent rect. 12 12
470 113.69 temperature 10.0 720 > th dose independent rect. 19 5
471 113.69 temperature 30.0 720 < th dose independent rect. 19 5
472 113.69 humidity 50.0 720 > th dose independent rect. 19 5
473 113.69 atmosphere 995.0 720 > th dose independent rect. 19 5
474 113.69 radiation 1.0 720 < th dose independent rect. 19 5
479 113.69 temperature 10.0 720 > th dose independent rect. 24 19
490 113.75 wind 9.0 720 < th dose independent rect. 7 5
491 113.77 temperature 10.0 10 > th dose independent rect. 2 10
493 113.77 atmosphere 995.0 10 > th dose independent rect. 2 10
494 113.77 atmosphere 1015.0 10 < th dose independent rect. 2 10
496 113.77 temperature 10.0 10 > th dose independent rect. 12 14
503 113.83 wind 1.0 720 > th dose independent rect. 12 1
506 113.85 atmosphere 1015.0 720 < th dose independent rect. 24 1
518 113.91 temperature 10.0 720 > th dose dependent rect. 24 1
523 113.93 wind 9.0 270 < th dose independent rect. 14 13
525 113.94 radiation 1.0 720 > th dose independent rect. 7 5
528 113.96 atmosphere 995.0 720 > th dose independent rect. 24 19
532 113.97 precipitation 0.1 270 < th dose independent rect. 23 11
534 113.97 precipitation 0.1 270 < th dose dependent rect. 23 11
541 114.02 wind 9.0 10 < th dose independent rect. 24 12
543 114.03 humidity 50.0 720 > th dose independent rect. 7 5
544 114.03 wind 9.0 720 < th dose dependent rect. 24 1
555 114.15 atmosphere 1015.0 10 < th dose independent rect. 24 12
576 114.27 temperature 25.0 90 < th dose dependent rect. 12 23
584 114.35 wind 9.0 720 < th dose independent rect. 12 19
601 114.46 wind 9.0 720 < th dose independent rect. 12 1
610 114.51 atmosphere 995.0 720 > th dose independent rect. 7 20
627 114.61 temperature 25.0 90 < th dose dependent rect. 17 18
628 114.62 wind 1.0 30 > th dose independent rect. 12 12
637 114.64 temperature 30.0 270 < th dose independent rect. 23 11
660 114.77 wind 9.0 720 < th dose independent rect. 3 20
662 114.78 temperature 15.0 720 > th dose independent rect. 24 1
666 114.78 temperature 25.0 10 < th dose dependent rect. 4 22
671 114.80 temperature 30.0 90 < th dose dependent sin 10 NA
672 114.81 temperature 10.0 10 > th dose independent rect. 12 12
674 114.81 atmosphere 995.0 10 > th dose independent rect. 24 12
678 114.86 temperature 10.0 720 > th dose independent rect. 12 1
679 114.86 atmosphere 995.0 720 > th dose independent rect. 12 1
680 114.86 atmosphere 1015.0 720 < th dose independent rect. 12 1
682 114.86 temperature 10.0 720 > th dose independent rect. 13 23
694 114.93 precipitation 0.1 720 < th dose independent rect. 12 1
695 114.93 precipitation 0.1 720 < th dose dependent rect. 12 1
714 115.00 wind 7.0 720 < th dose independent rect. 24 1
762 115.09 temperature 10.0 1440 > th dose independent rect. 1 12
765 115.09 temperature 10.0 1440 > th dose independent rect. 13 12
768 115.09 atmosphere 995.0 1440 > th dose independent rect. 1 12
770 115.11 wind 1.0 90 > th dose independent rect. 5 11
790 115.18 humidity 50.0 720 > th dose independent rect. 22 14
793 115.19 temperature 25.0 270 > th dose independent rect. 15 17
810 115.24 radiation 20.0 90 < th dose independent rect. 15 14
814 115.25 temperature 30.0 720 < th dose independent rect. 24 1
815 115.25 humidity 50.0 720 > th dose independent rect. 24 1
818 115.25 atmosphere 995.0 720 > th dose independent rect. 24 1
819 115.25 radiation 1.0 720 < th dose independent rect. 24 1
825 115.25 temperature 10.0 720 > th dose independent rect. 1 23
826 115.25 radiation 1.0 720 < th dose dependent rect. 24 1
849 115.32 precipitation 0.1 720 < th dose independent rect. 24 19
852 115.32 precipitation 0.1 720 < th dose dependent rect. 24 19
932 115.54 atmosphere 1015.0 720 < th dose independent rect. 6 15
948 115.58 atmosphere 995.0 720 > th dose independent rect. 15 20
957 115.63 precipitation 0.1 720 < th dose independent rect. 24 1
958 115.63 precipitation 0.1 720 < th dose dependent rect. 24 1
961 115.64 atmosphere 1015.0 720 < th dose independent rect. 23 20
992 115.72 humidity 50.0 720 > th dose dependent rect. 3 4
999 115.74 temperature 10.0 1440 > th dose independent rect. 3 10