Os02g0782200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : NOT2/NOT3/NOT5 domain containing protein.
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Os02g0782200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : NOT2/NOT3/NOT5 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11.54 | 0.16 | 9.24 | 0.143 | 0.553 | -0.471 | -1.01 | 1.01 | 0.16 | 3.78 | 19.31 | 5248 | -- | -- |
| 12.14 | 0.162 | 9.25 | -0.0333 | 0.561 | -0.565 | -0.932 | -- | 0.169 | 3.92 | 15.13 | 8616 | -- | -- |
| 13.49 | 0.172 | 9.25 | 0.0532 | 0.373 | -0.613 | -- | 1.73 | 0.155 | 4.98 | 18.57 | 5917 | -- | -- |
| 14.85 | 0.179 | 9.27 | -0.0435 | 0.551 | -0.581 | -- | -- | 0.154 | 3.85 | 14.5 | 8078 | -- | -- |
| 19.21 | 0.205 | 9.24 | 0.127 | -- | -0.865 | -- | 1.8 | 0.209 | -- | 19.46 | 6195 | -- | -- |
| 17.76 | 0.198 | 9.31 | -0.366 | 0.538 | -- | -1.01 | -- | -0.0245 | 3.93 | -- | -- | -- | -- |
| 20.74 | 0.213 | 9.3 | -0.352 | 0.534 | -- | -- | -- | -0.0188 | 4.03 | -- | -- | -- | -- |
| 22.68 | 0.223 | 9.28 | -0.178 | -- | -0.775 | -- | -- | 0.12 | -- | 19.46 | 6195 | -- | -- |
| 14.88 | 0.18 | 9.26 | -- | 0.552 | -0.602 | -- | -- | 0.164 | 3.86 | 14.49 | 8101 | -- | -- |
| 36.28 | 0.281 | 9.31 | -0.33 | -- | -- | -- | -- | -0.00454 | -- | -- | -- | -- | -- |
| 24.01 | 0.229 | 9.29 | -- | 0.527 | -- | -- | -- | 0.0204 | 4.04 | -- | -- | -- | -- |
| 23.37 | 0.226 | 9.27 | -- | -- | -1.01 | -- | -- | 0.147 | -- | 14.6 | 7656 | -- | -- |
| 39.16 | 0.292 | 9.3 | -- | -- | -- | -- | -- | 0.0321 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 11.06 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 2 | 11.09 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 12 | 11.11 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 15 | 11.18 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 12 |
| 16 | 11.18 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 16 |
| 17 | 11.18 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 16 |
| 23 | 11.20 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 12 |
| 31 | 11.21 | wind | 5 | 43200 | > th | dose independent | sin | 23 | NA |
| 32 | 11.21 | wind | 5 | 43200 | < th | dose independent | sin | 23 | NA |
| 61 | 11.24 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 75 | 11.25 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 119 | 11.29 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 125 | 11.29 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 134 | 11.30 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 163 | 11.31 | wind | 3 | 43200 | > th | dose dependent | rect. | 8 | 8 |
| 177 | 11.32 | wind | 3 | 43200 | > th | dose dependent | rect. | 7 | 10 |
| 181 | 11.33 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 200 | 11.34 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 201 | 11.34 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 213 | 11.34 | wind | 3 | 43200 | > th | dose dependent | sin | 0 | NA |
| 217 | 11.34 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 17 |
| 233 | 11.35 | humidity | 80 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 234 | 11.35 | wind | 9 | 43200 | < th | dose dependent | rect. | 8 | 7 |
| 236 | 11.36 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 276 | 11.37 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 21 |
| 286 | 11.38 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 307 | 11.38 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 21 |
| 320 | 11.39 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 321 | 11.39 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 451 | 11.43 | humidity | 90 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 503 | 11.45 | wind | 5 | 43200 | < th | dose independent | no | NA | NA |
| 558 | 11.46 | wind | 5 | 43200 | < th | dose independent | rect. | 19 | 23 |
| 597 | 11.48 | wind | 5 | 43200 | > th | dose independent | no | NA | NA |
| 691 | 11.50 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 23 |
| 695 | 11.50 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 696 | 11.50 | wind | 5 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 707 | 11.51 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 724 | 11.51 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 800 | 11.53 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 804 | 11.53 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 2 |
| 805 | 11.53 | wind | 1 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 806 | 11.53 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 3 |
| 876 | 11.54 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 908 | 11.55 | wind | 5 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 909 | 11.55 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 912 | 11.55 | wind | 5 | 43200 | < th | dose dependent | rect. | 9 | 3 |
| 958 | 11.55 | temperature | 10 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 982 | 11.56 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 11 | 1 |