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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0781900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.71 (0.0442) R2 : 0.145
β1 : 1.07 (0.162) R2dD : 0.0846 R2D : 0.0552
β2 : -- (--) R2dC : -- R2C : --
β3 : 5.02 (0.834) R2dE : 0.0685 R2E : 0.0522
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.288 (0.0945) R2dN8 : 0.0229 R2N8 : 0.000886
σ : 0.828
deviance : 315.76
__
_____
C
peak time of C : --
E
wheather : wind
threshold : 0.8115
memory length : 45
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 0.238
open length of G : 1.07

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
301.16 0.815 3.74 0.988 0.545 7.59 0.0408 -27.4 0.297 17.6 0.906 78 0.0151 1.05
304.36 0.813 3.7 1.21 0.559 6.95 -0.142 -- 0.327 16.8 0.8274 49 0.266 1.08
299.74 0.806 3.72 1.02 0.539 7.61 -- -27.5 0.32 17.7 0.8 78 0.0167 0.996
300.42 0.807 3.71 1.1 0.558 5.29 -- -- 0.293 17.4 0.6 45 0.23 1.03
314.61 0.826 3.73 0.993 -- 7.77 -- -28.1 0.276 -- 0.7025 78 0.0165 1
326.87 0.848 3.72 1.02 0.515 -- 0.26 -- 0.273 17.6 -- -- -- --
326.99 0.847 3.72 1.02 0.518 -- -- -- 0.274 17.8 -- -- -- --
315.76 0.828 3.71 1.07 -- 5.02 -- -- 0.288 -- 0.8115 45 0.238 1.07
331.21 0.848 3.75 -- 0.528 4.95 -- -- 0.166 17.6 0.884 49 0.324 1.01
340.91 0.863 3.71 1 -- -- -- -- 0.262 -- -- -- -- --
354.28 0.88 3.75 -- 0.502 -- -- -- 0.161 17.9 -- -- -- --
345.65 0.866 3.74 -- -- 4.65 -- -- 0.165 -- 0.8616 49 0.349 0.967
367.36 0.895 3.74 -- -- -- -- -- 0.151 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 305.02 wind 1.0 90 < th dose dependent rect. 24 1
2 311.32 wind 1.0 90 < th dose independent rect. 24 1
3 311.40 humidity 60.0 14400 > th dose independent rect. 21 1
4 311.89 wind 1.0 720 > th dose dependent rect. 21 2
5 311.96 atmosphere 995.0 30 > th dose independent rect. 21 23
7 312.54 temperature 30.0 10 > th dose independent rect. 13 6
23 312.91 atmosphere 995.0 90 > th dose independent rect. 6 13
24 313.51 atmosphere 1005.0 30 < th dose dependent rect. 24 2
27 313.58 temperature 20.0 90 > th dose dependent rect. 15 4
35 313.75 wind 3.0 720 > th dose independent rect. 21 2
41 314.29 temperature 20.0 30 > th dose dependent rect. 13 7
47 314.65 atmosphere 995.0 270 > th dose independent rect. 4 13
48 314.69 radiation 10.0 90 < th dose independent rect. 19 11
49 314.79 temperature 25.0 90 > th dose independent rect. 15 4
50 314.85 atmosphere 995.0 10 > th dose independent rect. 6 14
51 314.90 radiation 1.0 14400 < th dose dependent rect. 21 1
57 315.18 temperature 30.0 270 < th dose independent rect. 8 13
59 315.32 wind 5.0 90 < th dose independent rect. 19 11
64 315.47 temperature 25.0 270 > th dose dependent rect. 15 1
71 315.53 temperature 20.0 30 > th dose dependent rect. 13 15
74 315.58 atmosphere 1000.0 720 > th dose independent rect. 6 3
79 315.63 temperature 25.0 90 > th dose independent rect. 13 6
82 315.67 temperature 20.0 270 > th dose dependent rect. 13 4
85 315.75 temperature 30.0 10 > th dose independent rect. 14 1
93 315.79 temperature 15.0 30 > th dose dependent rect. 13 17
94 315.81 wind 7.0 720 < th dose independent rect. 16 5
111 316.00 humidity 60.0 14400 > th dose independent rect. 21 10
121 316.12 wind 5.0 10 < th dose dependent rect. 20 1
125 316.16 temperature 30.0 10 < th dose dependent rect. 20 1
129 316.17 temperature 20.0 270 > th dose dependent rect. 12 19
130 316.18 temperature 10.0 1440 > th dose independent rect. 21 1
133 316.18 temperature 30.0 1440 < th dose independent rect. 21 1
137 316.18 humidity 50.0 1440 > th dose independent rect. 21 1
143 316.18 atmosphere 995.0 1440 > th dose independent rect. 21 1
144 316.18 radiation 1.0 1440 < th dose independent rect. 21 1
164 316.18 temperature 10.0 1440 > th dose independent rect. 22 23
167 316.19 temperature 25.0 30 > th dose independent rect. 20 1
168 316.19 humidity 50.0 270 > th dose independent rect. 8 13
169 316.19 atmosphere 995.0 720 > th dose independent rect. 11 22
171 316.20 precipitation 0.1 90 < th dose independent rect. 6 13
172 316.20 wind 1.0 90 < th dose independent rect. 12 14
174 316.20 temperature 25.0 30 > th dose dependent rect. 20 1
177 316.20 precipitation 0.1 90 < th dose dependent rect. 6 13
178 316.21 wind 5.0 10 < th dose independent rect. 20 1
184 316.22 wind 3.0 30 > th dose dependent rect. 4 5
187 316.24 humidity 90.0 30 < th dose independent rect. 20 1
188 316.24 atmosphere 1005.0 10 > th dose independent rect. 20 1
192 316.25 humidity 80.0 30 > th dose independent rect. 20 1
195 316.25 humidity 90.0 30 < th dose dependent rect. 20 1
198 316.27 wind 1.0 30 > th dose independent rect. 20 1
200 316.27 temperature 10.0 30 > th dose independent rect. 20 1
203 316.27 temperature 30.0 30 < th dose independent rect. 20 1
204 316.27 humidity 50.0 30 > th dose independent rect. 20 1
207 316.27 atmosphere 995.0 30 > th dose independent rect. 20 1
208 316.27 atmosphere 1010.0 30 < th dose independent rect. 20 1
210 316.27 radiation 1.0 30 < th dose independent rect. 20 1
215 316.27 precipitation 0.1 30 < th dose independent rect. 20 1
216 316.27 temperature 10.0 30 > th dose independent rect. 21 23
218 316.27 temperature 10.0 30 > th dose dependent rect. 20 1
220 316.27 atmosphere 1005.0 30 > th dose dependent rect. 20 1
221 316.27 atmosphere 1015.0 30 < th dose dependent rect. 20 1
222 316.27 radiation 1.0 30 < th dose dependent rect. 20 1
227 316.27 precipitation 0.1 30 < th dose dependent rect. 20 1
229 316.28 atmosphere 1000.0 270 > th dose independent rect. 8 13
230 316.28 wind 9.0 720 < th dose independent rect. 23 22
231 316.28 atmosphere 995.0 30 > th dose dependent rect. 20 1
234 316.29 humidity 50.0 30 > th dose dependent rect. 20 1
237 316.30 radiation 20.0 30 < th dose independent rect. 21 14
242 316.31 radiation 10.0 90 < th dose dependent rect. 19 11
252 316.35 precipitation 0.1 10 < th dose independent rect. 21 23
254 316.35 precipitation 0.1 10 < th dose dependent rect. 21 23
257 316.37 wind 1.0 30 > th dose dependent rect. 20 1
266 316.40 wind 7.0 720 < th dose independent rect. 17 11
297 316.43 wind 7.0 720 < th dose independent rect. 16 13
304 316.47 humidity 70.0 270 > th dose independent rect. 21 11
310 316.50 wind 3.0 90 > th dose independent rect. 5 3
321 316.53 wind 9.0 270 < th dose independent rect. 8 13
325 316.55 wind 1.0 720 > th dose independent rect. 9 2
329 316.56 temperature 20.0 30 > th dose dependent rect. 13 20
335 316.59 precipitation 0.1 90 < th dose independent rect. 19 11
337 316.59 precipitation 0.1 90 < th dose dependent rect. 19 11
340 316.61 wind 1.0 10 > th dose independent rect. 6 14
342 316.62 humidity 90.0 14400 < th dose independent rect. 2 5
345 316.63 wind 1.0 90 < th dose independent rect. 23 3
350 316.66 temperature 10.0 90 > th dose independent rect. 19 11
351 316.66 temperature 30.0 90 < th dose independent rect. 19 11
352 316.66 humidity 50.0 90 > th dose independent rect. 19 11
354 316.66 atmosphere 995.0 90 > th dose independent rect. 19 11
358 316.66 temperature 10.0 90 > th dose independent rect. 6 13
359 316.66 atmosphere 1015.0 90 < th dose independent rect. 6 13
365 316.69 temperature 25.0 270 > th dose independent rect. 12 20
380 316.77 atmosphere 1005.0 10 < th dose dependent rect. 13 14
383 316.78 wind 1.0 270 > th dose independent rect. 8 13
386 316.78 wind 1.0 90 < th dose dependent rect. 13 2
393 316.80 temperature 25.0 270 > th dose independent rect. 13 4
415 316.87 wind 1.0 90 < th dose dependent rect. 13 12
424 316.91 radiation 10.0 10 < th dose independent rect. 20 10
432 316.95 temperature 20.0 30 > th dose dependent rect. 15 13
434 316.96 wind 1.0 14400 < th dose dependent rect. 2 1
449 317.00 temperature 25.0 90 > th dose dependent rect. 15 17
457 317.03 atmosphere 1000.0 270 > th dose independent rect. 21 11
458 317.03 radiation 40.0 270 < th dose independent rect. 21 11
472 317.06 temperature 10.0 30 > th dose dependent rect. 20 10
486 317.10 wind 9.0 720 < th dose independent rect. 9 2
489 317.11 precipitation 0.1 270 < th dose independent rect. 8 13
491 317.11 precipitation 0.1 270 < th dose dependent rect. 8 13
492 317.12 temperature 30.0 720 < th dose independent rect. 9 2
499 317.14 temperature 10.0 270 > th dose independent rect. 21 11
500 317.14 temperature 30.0 270 < th dose independent rect. 21 11
501 317.14 humidity 50.0 270 > th dose independent rect. 21 11
504 317.14 temperature 10.0 270 > th dose independent rect. 8 13
509 317.15 temperature 25.0 270 > th dose independent rect. 15 1
511 317.15 atmosphere 995.0 720 > th dose independent rect. 21 19
513 317.16 wind 3.0 90 > th dose independent rect. 7 1
518 317.17 wind 9.0 720 < th dose independent rect. 9 19
525 317.20 humidity 50.0 720 > th dose independent rect. 9 2
530 317.21 temperature 10.0 720 > th dose independent rect. 9 2
531 317.21 atmosphere 995.0 720 > th dose independent rect. 9 2
532 317.21 atmosphere 1015.0 720 < th dose independent rect. 9 2
534 317.21 temperature 10.0 720 > th dose independent rect. 11 22
551 317.27 precipitation 0.1 720 < th dose independent rect. 9 2
555 317.27 wind 9.0 30 < th dose independent rect. 21 23
556 317.27 precipitation 0.1 720 < th dose dependent rect. 9 2
559 317.27 radiation 40.0 10 < th dose dependent rect. 21 23
561 317.29 precipitation 0.1 720 < th dose independent rect. 21 2
562 317.29 wind 9.0 270 < th dose independent rect. 21 11
563 317.29 precipitation 0.1 720 < th dose dependent rect. 21 2
564 317.29 wind 9.0 720 < th dose dependent rect. 17 4
597 317.35 wind 1.0 90 > th dose independent rect. 6 13
600 317.35 radiation 40.0 90 < th dose dependent rect. 21 13
613 317.39 precipitation 0.1 270 < th dose independent rect. 21 11
615 317.39 precipitation 0.1 270 < th dose dependent rect. 21 11
617 317.40 wind 9.0 90 < th dose independent rect. 6 13
621 317.41 wind 1.0 14400 < th dose independent rect. 2 1
626 317.42 atmosphere 1010.0 90 < th dose independent rect. 19 11
650 317.47 atmosphere 1015.0 90 < th dose independent rect. 9 12
651 317.47 precipitation 0.1 720 < th dose independent rect. 11 22
653 317.47 precipitation 0.1 720 < th dose dependent rect. 11 22
656 317.48 atmosphere 995.0 720 > th dose independent rect. 13 20
686 317.56 wind 9.0 1440 < th dose independent rect. 21 1
755 317.74 temperature 20.0 90 > th dose dependent sin 16 NA
766 317.76 humidity 90.0 90 < th dose dependent rect. 15 4
778 317.79 precipitation 0.1 10 < th dose independent rect. 6 14
780 317.79 radiation 40.0 270 < th dose dependent rect. 21 11
781 317.79 precipitation 0.1 10 < th dose dependent rect. 6 14
782 317.80 wind 1.0 720 > th dose independent rect. 8 5
786 317.81 humidity 50.0 270 > th dose independent rect. 17 11
805 317.84 wind 9.0 10 < th dose dependent rect. 20 11
811 317.85 precipitation 0.1 270 < th dose independent rect. 17 11
816 317.85 precipitation 0.1 270 < th dose dependent rect. 17 11
820 317.86 humidity 70.0 10 < th dose independent rect. 16 3
841 317.89 temperature 10.0 10 > th dose independent rect. 20 10
842 317.89 temperature 30.0 10 < th dose independent rect. 20 10
843 317.89 humidity 50.0 10 > th dose independent rect. 20 10
846 317.89 atmosphere 995.0 10 > th dose independent rect. 20 10
851 317.89 temperature 10.0 10 > th dose independent rect. 6 14
853 317.89 atmosphere 1015.0 10 < th dose independent rect. 6 14
864 317.91 humidity 70.0 30 < th dose dependent rect. 16 3
879 317.93 wind 1.0 720 > th dose independent rect. 16 5
902 317.95 temperature 10.0 270 > th dose independent rect. 17 11
903 317.95 radiation 20.0 270 < th dose independent rect. 17 11
906 317.95 temperature 10.0 270 > th dose independent rect. 4 13
907 317.95 atmosphere 1015.0 270 < th dose independent rect. 4 13
925 317.98 temperature 10.0 1440 > th dose independent rect. 21 10
928 317.98 temperature 30.0 1440 < th dose independent rect. 21 10
932 317.98 humidity 50.0 1440 > th dose independent rect. 21 10
937 317.98 atmosphere 995.0 1440 > th dose independent rect. 21 10
938 317.98 radiation 40.0 1440 < th dose independent rect. 21 10
942 317.98 temperature 10.0 1440 > th dose independent rect. 7 14
945 317.98 temperature 10.0 90 > th dose dependent rect. 6 13
952 317.99 atmosphere 995.0 90 > th dose dependent rect. 9 12
960 318.02 humidity 90.0 14400 < th dose independent rect. 4 2
961 318.02 humidity 60.0 14400 > th dose independent rect. 2 6
964 318.02 wind 1.0 270 > th dose independent rect. 4 13
987 318.04 humidity 70.0 720 > th dose independent rect. 4 5
988 318.04 humidity 80.0 90 < th dose independent rect. 13 6
990 318.04 temperature 30.0 270 < th dose independent rect. 16 23
996 318.04 humidity 50.0 90 > th dose dependent rect. 21 13