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Os02g0780500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.25 (0.0293) R2 : 0.418
β1 : -1.81 (0.107) R2dD : 0.374 R2D : 0.254
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.614 (0.0626) R2dN8 : 0.164 R2N8 : 0.0441
σ : 0.551
deviance : 138.87
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
114.13 0.502 6.07 -0.246 0.113 -0.934 -1.84 5.33 -0.302 15.5 26.6 1442 -- --
119.21 0.509 6.21 -1.6 0.0801 -0.462 -1.87 -- -0.432 15.1 26.61 8800 -- --
123.82 0.518 6.07 -0.306 0.214 -0.912 -- 5.8 -0.289 17 26.59 1357 -- --
127.35 0.529 6.26 -1.7 0.391 -0.805 -- -- -0.593 16.7 26.59 1357 -- --
124.78 0.52 6.08 -0.295 -- -0.917 -- 5.52 -0.311 -- 26.46 1341 -- --
127.82 0.53 6.25 -1.77 0.117 -- -1.82 -- -0.6 15.4 -- -- -- --
136.71 0.548 6.26 -1.8 0.203 -- -- -- -0.61 18.9 -- -- -- --
131.61 0.534 6.22 -1.62 -- -0.437 -- -- -0.446 -- 26.39 10384 -- --
137.59 0.546 6.11 -- 0.205 -1.48 -- -- 0.0334 19.5 0.9595 47520 -- --
138.87 0.551 6.25 -1.81 -- -- -- -- -0.614 -- -- -- -- --
222.35 0.698 6.21 -- 0.225 -- -- -- -0.409 18.4 -- -- -- --
139.84 0.551 6.11 -- -- -1.48 -- -- 0.0307 -- -0.8658 47520 -- --
224.99 0.7 6.21 -- -- -- -- -- -0.413 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 107.77 temperature 30 270 < th dose independent rect. 9 16
2 108.58 temperature 30 270 < th dose independent rect. 7 19
3 108.66 temperature 10 270 > th dose dependent rect. 2 16
7 108.94 temperature 30 270 < th dose independent rect. 7 16
9 108.94 radiation 30 10 < th dose independent rect. 2 18
16 109.23 temperature 20 720 > th dose dependent rect. 21 13
22 109.60 temperature 20 720 > th dose dependent sin 8 NA
27 109.71 temperature 20 270 > th dose dependent rect. 1 17
57 110.46 radiation 30 10 < th dose independent rect. 4 16
59 110.48 temperature 30 270 < th dose independent rect. 7 8
62 110.56 humidity 90 43200 < th dose independent rect. 24 16
99 111.01 humidity 90 43200 > th dose independent rect. 24 16
115 111.10 temperature 30 270 < th dose independent rect. 17 22
144 111.26 humidity 90 43200 < th dose independent sin 5 NA
154 111.29 humidity 80 43200 > th dose dependent rect. 2 14
185 111.43 humidity 90 43200 < th dose independent rect. 2 9
191 111.45 humidity 90 43200 < th dose independent rect. 9 21
210 111.51 humidity 80 43200 > th dose dependent rect. 1 17
242 111.59 temperature 20 1440 > th dose dependent rect. 21 1
292 111.69 humidity 90 43200 > th dose independent sin 6 NA
295 111.69 humidity 90 43200 > th dose independent rect. 9 20
301 111.71 humidity 90 43200 < th dose independent no NA NA
340 111.79 radiation 10 720 < th dose independent sin 11 NA
392 111.88 humidity 90 43200 > th dose independent rect. 12 22
394 111.88 humidity 80 43200 > th dose dependent sin 3 NA
423 111.93 temperature 30 270 < th dose independent sin 22 NA
437 111.96 humidity 90 43200 > th dose independent no NA NA
458 112.00 radiation 10 720 < th dose independent rect. 17 15
476 112.03 temperature 20 720 > th dose dependent rect. 4 5
516 112.13 humidity 70 270 > th dose independent rect. 17 9
528 112.16 radiation 10 720 < th dose independent rect. 6 1
565 112.24 wind 7 43200 > th dose dependent rect. 9 6
591 112.31 radiation 10 720 < th dose independent rect. 21 11
600 112.32 radiation 40 10 < th dose dependent rect. 2 18
620 112.41 humidity 90 43200 < th dose independent sin 16 NA
621 112.41 wind 9 43200 > th dose independent rect. 9 6
637 112.43 wind 7 43200 > th dose dependent rect. 5 10
670 112.48 wind 7 43200 > th dose dependent rect. 24 15
694 112.51 wind 7 43200 > th dose dependent rect. 22 17
700 112.53 radiation 10 270 < th dose independent rect. 2 16
707 112.54 humidity 90 43200 > th dose independent sin 16 NA
724 112.57 radiation 10 720 < th dose independent rect. 23 9
753 112.62 radiation 30 10 < th dose independent rect. 4 14
761 112.62 humidity 90 43200 > th dose dependent rect. 9 21
775 112.64 wind 9 43200 < th dose independent rect. 9 6
776 112.64 temperature 20 1440 > th dose dependent rect. 20 6
798 112.66 temperature 25 1440 > th dose independent rect. 21 1
819 112.68 wind 9 43200 < th dose independent rect. 4 11
842 112.69 temperature 20 270 > th dose dependent rect. 12 22
846 112.69 humidity 90 43200 > th dose dependent rect. 18 23
851 112.70 humidity 90 43200 > th dose dependent no NA NA
856 112.71 temperature 25 1440 < th dose independent rect. 21 1
900 112.75 temperature 25 1440 > th dose dependent sin 13 NA
907 112.76 temperature 30 270 < th dose independent sin 16 NA
922 112.78 wind 9 43200 < th dose independent rect. 24 15
943 112.79 humidity 90 43200 > th dose dependent rect. 4 23
945 112.80 wind 9 43200 > th dose independent rect. 5 10
949 112.80 wind 9 43200 > th dose independent rect. 22 17
959 112.81 wind 9 43200 < th dose independent rect. 22 17
965 112.82 humidity 90 43200 > th dose dependent rect. 4 3
967 112.82 temperature 25 1440 > th dose dependent rect. 16 6
982 112.84 wind 9 43200 > th dose independent rect. 24 15