Os02g0779300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0779300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.93 | 0.415 | 8.85 | 2.06 | 0.597 | -0.949 | 0.346 | 2.25 | 0.656 | 3.4 | 2.761 | 1400 | -- | -- |
| 81.97 | 0.422 | 8.84 | 2.28 | 0.55 | -1.3 | 0.113 | -- | 0.68 | 4.45 | 1.665 | 1368 | -- | -- |
| 78.29 | 0.412 | 8.85 | 2.05 | 0.604 | -0.96 | -- | 2.2 | 0.653 | 3.38 | 2.79 | 1404 | -- | -- |
| 81.86 | 0.421 | 8.83 | 2.27 | 0.561 | -1.32 | -- | -- | 0.721 | 4.2 | 1.233 | 1376 | -- | -- |
| 96.86 | 0.458 | 8.85 | 2.1 | -- | -1.15 | -- | 2.34 | 0.648 | -- | 2.998 | 1372 | -- | -- |
| 99.68 | 0.468 | 8.78 | 2.58 | 0.651 | -- | 0.304 | -- | 0.885 | 2.99 | -- | -- | -- | -- |
| 99.99 | 0.468 | 8.78 | 2.57 | 0.653 | -- | -- | -- | 0.883 | 3.01 | -- | -- | -- | -- |
| 98.82 | 0.463 | 8.83 | 2.31 | -- | -1.39 | -- | -- | 0.71 | -- | 2.016 | 1372 | -- | -- |
| 205.83 | 0.668 | 8.82 | -- | 0.6 | -2.16 | -- | -- | 0.744 | 3.71 | 0.17 | 1406 | -- | -- |
| 124.44 | 0.521 | 8.78 | 2.6 | -- | -- | -- | -- | 0.9 | -- | -- | -- | -- | -- |
| 274.36 | 0.775 | 8.84 | -- | 0.704 | -- | -- | -- | 0.597 | 3.03 | -- | -- | -- | -- |
| 213.94 | 0.681 | 8.89 | -- | -- | -2.49 | -- | -- | 0.412 | -- | 0.05 | 1387 | -- | -- |
| 302.77 | 0.812 | 8.84 | -- | -- | -- | -- | -- | 0.612 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.06 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 4 |
| 2 | 75.36 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 3 | 75.38 | radiation | 1 | 1440 | < th | dose dependent | rect. | 10 | 7 |
| 11 | 76.15 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 4 |
| 12 | 76.26 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 4 |
| 14 | 76.37 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 6 |
| 15 | 76.39 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 6 |
| 20 | 76.49 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 22 | 76.52 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 23 | 76.54 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 31 | 76.73 | radiation | 1 | 720 | < th | dose independent | rect. | 5 | 19 |
| 43 | 77.15 | radiation | 1 | 720 | < th | dose independent | rect. | 5 | 21 |
| 56 | 77.59 | radiation | 1 | 720 | < th | dose independent | rect. | 5 | 13 |
| 63 | 77.76 | humidity | 90 | 270 | > th | dose dependent | rect. | 5 | 21 |
| 67 | 77.86 | radiation | 1 | 1440 | > th | dose independent | rect. | 5 | 12 |
| 68 | 77.91 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 15 |
| 69 | 77.91 | radiation | 1 | 1440 | < th | dose independent | rect. | 22 | 19 |
| 95 | 78.13 | radiation | 1 | 1440 | > th | dose independent | sin | 23 | NA |
| 99 | 78.19 | radiation | 1 | 1440 | < th | dose independent | sin | 23 | NA |
| 105 | 78.24 | radiation | 1 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 106 | 78.24 | radiation | 1 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 111 | 78.29 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 19 |
| 150 | 78.54 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 156 | 78.56 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 12 |
| 332 | 79.17 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 21 |
| 341 | 79.20 | radiation | 1 | 1440 | > th | dose independent | no | NA | NA |
| 394 | 79.20 | radiation | 1 | 1440 | < th | dose dependent | rect. | 22 | 19 |
| 398 | 79.21 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 15 |
| 402 | 79.22 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 21 |
| 411 | 79.22 | radiation | 1 | 720 | < th | dose dependent | rect. | 20 | 22 |
| 426 | 79.24 | radiation | 1 | 1440 | < th | dose independent | no | NA | NA |
| 444 | 79.25 | humidity | 90 | 720 | > th | dose dependent | rect. | 9 | 15 |
| 466 | 79.49 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 504 | 79.70 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 510 | 79.72 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 12 |
| 534 | 79.83 | radiation | 1 | 1440 | < th | dose dependent | sin | 22 | NA |
| 719 | 80.43 | wind | 7 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 853 | 81.23 | wind | 7 | 14400 | > th | dose dependent | rect. | 11 | 7 |
| 864 | 81.27 | humidity | 80 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 901 | 81.59 | humidity | 90 | 720 | > th | dose independent | rect. | 20 | 3 |
| 928 | 81.64 | humidity | 80 | 1440 | < th | dose independent | rect. | 24 | 17 |
| 935 | 81.68 | wind | 9 | 14400 | < th | dose independent | rect. | 3 | 15 |
| 946 | 81.71 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 9 |
| 960 | 81.72 | wind | 9 | 14400 | < th | dose independent | rect. | 24 | 18 |
| 1000 | 81.75 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |