Os02g0779200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Subtilisin-like protease (Fragment).
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Os02g0779200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Subtilisin-like protease (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.04 | 0.379 | 11.6 | 1.2 | 1.52 | 0.633 | -0.0961 | 4.03 | -0.0989 | 13.9 | 6.173 | 10847 | -- | -- |
| 70.82 | 0.392 | 11.8 | 0.419 | 1.47 | 0.501 | -0.305 | -- | -0.214 | 13.8 | 29.74 | 6035 | -- | -- |
| 65.07 | 0.376 | 11.6 | 1.19 | 1.52 | 0.635 | -- | 4.03 | -0.0997 | 13.9 | 6.05 | 10877 | -- | -- |
| 70.41 | 0.391 | 11.8 | 0.378 | 1.52 | 0.488 | -- | -- | -0.221 | 13.9 | 30.19 | 6018 | -- | -- |
| 158.63 | 0.59 | 11.8 | 0.419 | -- | 1.86 | -- | 2.42 | -0.458 | -- | 6.05 | 10877 | -- | -- |
| 80.52 | 0.421 | 11.8 | 0.499 | 1.5 | -- | -0.183 | -- | -0.261 | 13.9 | -- | -- | -- | -- |
| 80.64 | 0.421 | 11.8 | 0.493 | 1.5 | -- | -- | -- | -0.262 | 13.9 | -- | -- | -- | -- |
| 143.45 | 0.56 | 11.9 | 0.139 | -- | 1.71 | -- | -- | -0.532 | -- | 23 | 47520 | -- | -- |
| 73.71 | 0.4 | 11.8 | -- | 1.5 | 0.552 | -- | -- | -0.246 | 13.9 | 30.21 | 6002 | -- | -- |
| 215.86 | 0.687 | 11.8 | 0.431 | -- | -- | -- | -- | -0.297 | -- | -- | -- | -- | -- |
| 87.05 | 0.436 | 11.8 | -- | 1.49 | -- | -- | -- | -0.317 | 13.9 | -- | -- | -- | -- |
| 143.95 | 0.561 | 11.9 | -- | -- | 1.73 | -- | -- | -0.55 | -- | 23 | 47520 | -- | -- |
| 220.77 | 0.694 | 11.8 | -- | -- | -- | -- | -- | -0.345 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.12 | temperature | 10 | 4320 | > th | dose dependent | rect. | 9 | 2 |
| 13 | 64.59 | temperature | 30 | 4320 | < th | dose dependent | rect. | 8 | 2 |
| 28 | 64.93 | temperature | 15 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 35 | 65.08 | temperature | 25 | 14400 | < th | dose dependent | rect. | 17 | 5 |
| 42 | 65.12 | temperature | 25 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 55 | 65.16 | temperature | 15 | 4320 | > th | dose dependent | rect. | 8 | 12 |
| 75 | 65.23 | temperature | 25 | 14400 | < th | dose dependent | sin | 19 | NA |
| 86 | 65.25 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 125 | 65.32 | temperature | 20 | 14400 | > th | dose independent | rect. | 19 | 7 |
| 139 | 65.34 | wind | 9 | 43200 | < th | dose independent | sin | 10 | NA |
| 196 | 65.45 | wind | 9 | 43200 | > th | dose independent | sin | 10 | NA |
| 283 | 65.58 | temperature | 20 | 14400 | > th | dose independent | sin | 15 | NA |
| 377 | 65.70 | temperature | 20 | 14400 | < th | dose independent | rect. | 19 | 6 |
| 421 | 65.75 | temperature | 25 | 14400 | < th | dose dependent | no | NA | NA |
| 434 | 65.76 | temperature | 25 | 14400 | < th | dose dependent | rect. | 5 | 10 |
| 447 | 65.77 | temperature | 25 | 14400 | < th | dose dependent | rect. | 14 | 23 |
| 452 | 65.78 | temperature | 10 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 462 | 65.78 | temperature | 25 | 14400 | < th | dose dependent | rect. | 21 | 23 |
| 476 | 65.79 | temperature | 25 | 14400 | < th | dose dependent | rect. | 6 | 8 |
| 565 | 65.86 | temperature | 15 | 4320 | > th | dose dependent | sin | 21 | NA |
| 587 | 65.88 | wind | 7 | 43200 | > th | dose dependent | sin | 10 | NA |
| 607 | 65.89 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 13 |
| 614 | 65.90 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 19 |
| 664 | 65.94 | humidity | 60 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 768 | 66.01 | temperature | 20 | 14400 | < th | dose independent | sin | 15 | NA |
| 794 | 66.02 | humidity | 70 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 796 | 66.02 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 13 |
| 797 | 66.02 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 13 |
| 883 | 66.07 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 19 |
| 894 | 66.08 | humidity | 60 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 919 | 66.09 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 920 | 66.09 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 2 |