Os02g0778600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to CEL5=CELLULASE 5 (Fragment).
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Os02g0778600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to CEL5=CELLULASE 5 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 129.63 | 0.535 | 2.88 | 0.129 | 0.124 | 0.215 | 0.301 | 1.78 | -0.0708 | 9.06 | 40.64 | 263 | -- | -- |
| 131.45 | 0.538 | 2.88 | 0.0976 | 0.0872 | 0.139 | 0.525 | -- | -0.0651 | 11.3 | 38.57 | 203 | -- | -- |
| 129.92 | 0.531 | 2.88 | 0.139 | 0.109 | 0.252 | -- | 1.87 | -0.0726 | 8.91 | 41.61 | 248 | -- | -- |
| 132.54 | 0.536 | 2.88 | 0.122 | 0.107 | 0.25 | -- | -- | -0.0828 | 8.28 | 41.61 | 206 | -- | -- |
| 130.53 | 0.532 | 2.88 | 0.136 | -- | 0.295 | -- | 1.69 | -0.0731 | -- | 41.45 | 218 | -- | -- |
| 132.08 | 0.539 | 2.88 | 0.0975 | 0.131 | -- | 0.529 | -- | -0.0684 | 11.3 | -- | -- | -- | -- |
| 133.25 | 0.541 | 2.88 | 0.118 | 0.132 | -- | -- | -- | -0.0671 | 10.6 | -- | -- | -- | -- |
| 132.95 | 0.537 | 2.88 | 0.135 | -- | 0.255 | -- | -- | -0.079 | -- | 39.94 | 189 | -- | -- |
| 132.9 | 0.537 | 2.88 | -- | 0.102 | 0.254 | -- | -- | -0.0928 | 8.24 | 40 | 200 | -- | -- |
| 134.32 | 0.542 | 2.88 | 0.116 | -- | -- | -- | -- | -0.0677 | -- | -- | -- | -- | -- |
| 133.62 | 0.541 | 2.88 | -- | 0.131 | -- | -- | -- | -0.0802 | 10.5 | -- | -- | -- | -- |
| 133.31 | 0.538 | 2.89 | -- | -- | 0.269 | -- | -- | -0.0947 | -- | 41.47 | 183 | -- | -- |
| 134.67 | 0.542 | 2.88 | -- | -- | -- | -- | -- | -0.0805 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 120.78 | temperature | 30.0 | 270 | > th | dose dependent | rect. | 8 | 1 |
| 15 | 121.64 | temperature | 30.0 | 270 | > th | dose independent | rect. | 8 | 1 |
| 29 | 122.36 | radiation | 40.0 | 270 | > th | dose independent | rect. | 8 | 1 |
| 46 | 122.69 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 47 | 122.99 | radiation | 20.0 | 10 | < th | dose independent | rect. | 10 | 1 |
| 50 | 123.48 | humidity | 50.0 | 90 | < th | dose independent | rect. | 13 | 1 |
| 51 | 123.48 | humidity | 50.0 | 90 | < th | dose dependent | rect. | 13 | 1 |
| 54 | 123.65 | temperature | 25.0 | 90 | < th | dose independent | rect. | 8 | 1 |
| 128 | 124.12 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 13 | 5 |
| 149 | 124.21 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 1 |
| 173 | 124.28 | humidity | 50.0 | 10 | < th | dose independent | rect. | 13 | 5 |
| 231 | 124.41 | temperature | 30.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 309 | 124.70 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 9 | 1 |
| 328 | 124.75 | wind | 7.0 | 90 | > th | dose independent | rect. | 1 | 8 |
| 330 | 124.76 | wind | 7.0 | 90 | > th | dose dependent | rect. | 1 | 8 |
| 332 | 124.77 | wind | 7.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 337 | 124.80 | wind | 7.0 | 90 | > th | dose independent | rect. | 7 | 2 |
| 342 | 124.81 | wind | 7.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 349 | 124.90 | radiation | 40.0 | 90 | < th | dose independent | rect. | 10 | 22 |
| 392 | 125.18 | humidity | 50.0 | 30 | < th | dose dependent | sin | 7 | NA |
| 412 | 125.27 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 21 | 1 |
| 420 | 125.27 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 21 | 1 |
| 437 | 125.33 | temperature | 30.0 | 10 | < th | dose independent | rect. | 9 | 1 |
| 495 | 125.56 | humidity | 80.0 | 30 | < th | dose independent | rect. | 9 | 1 |
| 502 | 125.76 | wind | 1.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 509 | 125.93 | humidity | 50.0 | 10 | > th | dose independent | sin | 13 | NA |
| 510 | 125.95 | radiation | 40.0 | 90 | < th | dose independent | rect. | 10 | 9 |
| 512 | 125.97 | humidity | 50.0 | 10 | < th | dose independent | sin | 13 | NA |
| 519 | 126.01 | humidity | 50.0 | 10 | < th | dose dependent | sin | 12 | NA |
| 537 | 126.27 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 9 | 1 |
| 567 | 126.50 | humidity | 60.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 593 | 126.64 | humidity | 50.0 | 10 | > th | dose independent | rect. | 10 | 23 |
| 595 | 126.66 | atmosphere | 1010.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 596 | 126.66 | atmosphere | 1010.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 674 | 126.75 | wind | 1.0 | 30 | < th | dose dependent | rect. | 23 | 1 |
| 678 | 126.78 | wind | 1.0 | 270 | < th | dose dependent | rect. | 22 | 1 |
| 706 | 126.85 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 21 | 1 |
| 720 | 126.95 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 9 | 1 |
| 738 | 127.00 | wind | 1.0 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 741 | 127.03 | temperature | 25.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 747 | 127.06 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 754 | 127.08 | radiation | 40.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 797 | 127.14 | temperature | 30.0 | 10 | < th | dose independent | rect. | 10 | 23 |
| 803 | 127.18 | humidity | 50.0 | 90 | < th | dose independent | sin | 7 | NA |
| 804 | 127.18 | wind | 1.0 | 30 | > th | dose independent | rect. | 9 | 1 |
| 807 | 127.19 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 809 | 127.19 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 840 | 127.25 | wind | 7.0 | 30 | < th | dose independent | rect. | 9 | 1 |
| 843 | 127.25 | temperature | 15.0 | 30 | > th | dose independent | rect. | 10 | 23 |
| 856 | 127.28 | temperature | 10.0 | 30 | > th | dose independent | rect. | 9 | 1 |
| 858 | 127.28 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 863 | 127.28 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 866 | 127.28 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 9 | 1 |
| 867 | 127.28 | radiation | 1.0 | 30 | > th | dose independent | rect. | 9 | 1 |
| 868 | 127.28 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 9 | 1 |
| 870 | 127.28 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 874 | 127.28 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 9 | 1 |
| 909 | 127.37 | wind | 9.0 | 30 | < th | dose independent | rect. | 10 | 23 |
| 912 | 127.38 | radiation | 40.0 | 270 | < th | dose independent | rect. | 21 | 20 |
| 916 | 127.41 | radiation | 40.0 | 270 | < th | dose independent | rect. | 22 | 18 |
| 920 | 127.42 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 939 | 127.44 | wind | 1.0 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 943 | 127.45 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 1 |
| 967 | 127.50 | radiation | 40.0 | 90 | > th | dose independent | rect. | 12 | 1 |
| 974 | 127.53 | wind | 1.0 | 270 | < th | dose independent | rect. | 22 | 1 |
| 979 | 127.56 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 15 |