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Os02g0777700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Myosin XI B.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.6 (0.0188) R2 : 0.096
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.275 (0.0396) R2dN8 : 0.124 R2N8 : 0.096
σ : 0.354
deviance : 57.51
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.28 0.245 11.6 -0.867 0.53 -0.507 0.186 0.39 0.257 7.04 52 4038 -- --
27.09 0.242 11.6 -0.818 0.539 -0.42 0.253 -- 0.266 6.93 52 3588 -- --
27.37 0.244 11.6 -0.863 0.531 -0.509 -- 0.406 0.257 7 51.92 4038 -- --
27.22 0.243 11.6 -0.809 0.542 -0.402 -- -- 0.261 6.95 52.36 3588 -- --
42.06 0.302 11.6 -0.841 -- -0.47 -- 0.348 0.264 -- 51.31 4195 -- --
30.41 0.259 11.6 -0.703 0.527 -- 0.154 -- 0.189 6.74 -- -- -- --
30.46 0.258 11.6 -0.7 0.528 -- -- -- 0.189 6.71 -- -- -- --
41.94 0.302 11.6 -0.776 -- -0.339 -- -- 0.266 -- 53.07 2690 -- --
33.15 0.268 11.6 -- 0.522 -0.616 -- -- 0.302 6.73 63.92 47520 -- --
45.02 0.314 11.6 -0.688 -- -- -- -- 0.199 -- -- -- -- --
43.39 0.308 11.6 -- 0.52 -- -- -- 0.267 6.79 -- -- -- --
47.41 0.321 11.6 -- -- -0.612 -- -- 0.311 -- 63.16 47520 -- --
57.51 0.354 11.6 -- -- -- -- -- 0.275 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 24.58 precipitation 0.1 270 < th dose independent rect. 2 17
2 24.58 precipitation 0.1 270 < th dose dependent rect. 2 17
3 24.71 precipitation 0.1 270 < th dose independent rect. 19 7
4 24.71 precipitation 0.1 270 < th dose dependent rect. 19 7
5 24.76 wind 9.0 270 < th dose independent rect. 6 9
6 24.79 wind 7.0 270 < th dose independent rect. 19 7
8 24.80 temperature 10.0 270 > th dose independent rect. 19 7
9 24.80 temperature 30.0 270 < th dose independent rect. 19 7
10 24.80 humidity 50.0 270 > th dose independent rect. 19 7
12 24.80 atmosphere 995.0 270 > th dose independent rect. 19 7
13 24.80 radiation 1.0 270 < th dose independent rect. 19 7
19 24.80 temperature 10.0 270 > th dose independent rect. 2 17
20 24.80 atmosphere 1015.0 270 < th dose independent rect. 2 17
21 24.80 radiation 1.0 270 < th dose dependent rect. 19 7
27 24.83 humidity 50.0 270 > th dose independent rect. 6 9
28 24.83 radiation 40.0 270 < th dose independent rect. 15 15
29 24.84 humidity 50.0 270 > th dose dependent rect. 19 7
31 24.86 temperature 10.0 270 > th dose independent rect. 6 9
32 24.86 atmosphere 1015.0 270 < th dose independent rect. 6 9
33 24.86 precipitation 0.1 270 < th dose independent rect. 6 9
34 24.86 temperature 10.0 270 > th dose independent rect. 15 15
35 24.86 precipitation 0.1 270 < th dose dependent rect. 6 9
36 24.87 wind 9.0 270 < th dose independent rect. 15 15
38 24.91 wind 9.0 270 < th dose independent rect. 2 17
40 24.95 precipitation 0.1 270 < th dose independent rect. 15 15
42 24.95 precipitation 0.1 270 < th dose dependent rect. 15 15
43 24.99 temperature 20.0 270 > th dose independent rect. 6 9
54 25.01 atmosphere 995.0 270 > th dose independent rect. 6 9
64 25.05 wind 9.0 270 < th dose dependent rect. 19 7
65 25.07 humidity 50.0 270 > th dose independent rect. 19 19
73 25.16 temperature 10.0 270 > th dose dependent rect. 6 8
78 25.23 wind 1.0 270 > th dose independent rect. 6 9
82 25.26 atmosphere 1015.0 270 < th dose independent rect. 19 7
100 25.35 atmosphere 995.0 270 > th dose independent rect. 2 17
148 25.47 radiation 1.0 270 > th dose independent rect. 6 9
156 25.49 precipitation 0.1 270 < th dose independent rect. 15 4
157 25.49 wind 9.0 90 < th dose independent rect. 17 14
161 25.49 precipitation 0.1 270 < th dose dependent rect. 15 4
175 25.51 temperature 10.0 90 > th dose independent rect. 17 14
176 25.51 radiation 40.0 90 < th dose independent rect. 17 14
177 25.51 radiation 20.0 90 < th dose independent rect. 17 15
183 25.52 wind 9.0 270 < th dose independent rect. 19 19
208 25.55 radiation 40.0 270 < th dose independent rect. 14 5
222 25.57 wind 1.0 270 > th dose independent rect. 14 5
224 25.58 temperature 10.0 270 > th dose independent rect. 14 5
226 25.58 atmosphere 1010.0 270 < th dose independent rect. 14 5
230 25.58 temperature 10.0 270 > th dose independent rect. 19 19
231 25.58 atmosphere 995.0 270 > th dose independent rect. 19 19
238 25.59 wind 9.0 270 < th dose dependent rect. 1 8
245 25.60 wind 9.0 270 < th dose independent rect. 14 5
279 25.64 atmosphere 995.0 270 > th dose independent rect. 15 15
281 25.64 humidity 50.0 270 > th dose independent rect. 6 20
336 25.67 precipitation 0.1 270 < th dose independent rect. 19 19
340 25.67 precipitation 0.1 270 < th dose dependent rect. 19 19
346 25.68 radiation 1.0 90 > th dose independent rect. 8 9
352 25.68 humidity 50.0 270 > th dose independent rect. 7 18
363 25.69 temperature 20.0 10 > th dose independent rect. 8 9
376 25.71 temperature 10.0 270 > th dose dependent rect. 19 7
377 25.71 temperature 10.0 10 > th dose dependent rect. 8 9
455 25.81 atmosphere 995.0 90 > th dose independent rect. 17 14
464 25.82 wind 1.0 270 > th dose independent rect. 19 7
485 25.84 humidity 50.0 10 > th dose independent rect. 8 8
508 25.86 radiation 40.0 90 < th dose dependent rect. 16 16
530 25.89 radiation 1.0 90 > th dose independent rect. 17 14
532 25.89 wind 1.0 270 > th dose independent rect. 19 19
540 25.90 precipitation 0.1 270 < th dose independent rect. 1 7
544 25.90 precipitation 0.1 270 < th dose dependent rect. 1 7
558 25.91 wind 5.0 270 < th dose independent rect. 1 7
571 25.92 humidity 50.0 10 > th dose independent rect. 17 15
575 25.92 wind 7.0 270 < th dose dependent rect. 2 5
580 25.93 wind 9.0 10 < th dose independent rect. 8 9
596 25.95 wind 9.0 10 < th dose independent rect. 17 15
598 25.95 atmosphere 1015.0 270 < th dose independent rect. 19 19
604 25.96 atmosphere 1000.0 270 > th dose independent rect. 14 5
615 25.96 atmosphere 995.0 270 > th dose dependent rect. 14 5
620 25.97 wind 5.0 90 < th dose independent rect. 17 2
650 25.98 temperature 10.0 270 > th dose dependent rect. 15 4
667 25.99 radiation 1.0 10 > th dose independent rect. 8 9
669 25.99 wind 9.0 270 < th dose independent rect. 8 17
676 25.99 radiation 1.0 270 < th dose dependent rect. 12 14
696 26.00 wind 9.0 90 < th dose dependent rect. 17 2
697 26.00 temperature 10.0 270 > th dose dependent rect. 20 5
707 26.01 temperature 10.0 10 > th dose independent rect. 8 9
709 26.01 atmosphere 1015.0 10 < th dose independent rect. 8 9
710 26.01 precipitation 0.1 10 < th dose independent rect. 8 9
711 26.01 temperature 10.0 10 > th dose independent rect. 17 15
713 26.01 wind 9.0 270 < th dose dependent rect. 15 4
719 26.01 precipitation 0.1 10 < th dose dependent rect. 8 9
739 26.03 radiation 40.0 10 < th dose independent rect. 17 15
746 26.03 atmosphere 1015.0 270 < th dose dependent rect. 7 7
748 26.03 atmosphere 1015.0 10 < th dose dependent rect. 8 8
768 26.05 temperature 10.0 270 > th dose independent rect. 1 7
771 26.05 temperature 30.0 270 < th dose independent rect. 1 7
772 26.05 humidity 50.0 270 > th dose independent rect. 1 7
774 26.05 atmosphere 995.0 270 > th dose independent rect. 1 7
775 26.05 atmosphere 1015.0 270 < th dose independent rect. 1 7
779 26.05 temperature 10.0 270 > th dose independent rect. 8 17
801 26.07 wind 5.0 270 < th dose independent rect. 2 4
816 26.07 atmosphere 995.0 90 > th dose dependent rect. 4 16
820 26.08 radiation 40.0 270 < th dose independent rect. 1 7
868 26.10 temperature 10.0 90 > th dose dependent rect. 17 2
893 26.11 radiation 40.0 90 < th dose dependent rect. 4 17
895 26.12 precipitation 0.1 270 < th dose independent rect. 2 4
903 26.12 humidity 50.0 10 > th dose independent rect. 22 18
905 26.12 precipitation 0.1 270 < th dose dependent rect. 2 4
906 26.12 humidity 50.0 270 > th dose dependent rect. 2 5
911 26.13 wind 1.0 30 > th dose independent rect. 16 6
922 26.13 atmosphere 995.0 270 > th dose dependent rect. 2 17
942 26.14 radiation 20.0 270 < th dose independent rect. 1 8
973 26.15 precipitation 0.1 270 < th dose independent rect. 8 17
975 26.15 radiation 40.0 270 < th dose dependent rect. 1 8
978 26.15 wind 9.0 270 < th dose dependent rect. 2 17
979 26.15 precipitation 0.1 270 < th dose dependent rect. 8 17
981 26.16 temperature 10.0 90 > th dose independent rect. 17 2
983 26.16 atmosphere 1010.0 90 < th dose independent rect. 17 2
985 26.16 radiation 20.0 90 < th dose independent rect. 17 2