Os02g0776600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0776600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.65 | 0.414 | 2.9 | 0.0842 | 0.132 | -0.163 | 0.115 | 0.29 | 0.0414 | 19 | 77.88 | 303 | -- | -- |
| 77.88 | 0.411 | 2.9 | 0.0708 | 0.129 | -0.166 | 0.306 | -- | 0.0378 | 18.2 | 77.24 | 295 | -- | -- |
| 77.68 | 0.41 | 2.9 | 0.0855 | 0.133 | -0.164 | -- | 0.33 | 0.0434 | 19.1 | 78 | 309 | -- | -- |
| 78.06 | 0.412 | 2.9 | 0.0648 | 0.124 | -0.151 | -- | -- | 0.0384 | 19.3 | 78 | 306 | -- | -- |
| 78.3 | 0.412 | 2.89 | 0.0853 | -- | -0.104 | -- | 0.313 | 0.0394 | -- | 78 | 295 | -- | -- |
| 78.66 | 0.416 | 2.9 | 0.0469 | 0.0901 | -- | -0.2 | -- | 0.0325 | 1.56 | -- | -- | -- | -- |
| 78.77 | 0.416 | 2.9 | 0.054 | 0.0935 | -- | -- | -- | 0.0342 | 0.244 | -- | -- | -- | -- |
| 78.55 | 0.415 | 2.9 | 0.0645 | -- | -0.0832 | -- | -- | 0.0326 | -- | 79 | 284 | -- | -- |
| 78.17 | 0.412 | 2.9 | -- | 0.122 | -0.148 | -- | -- | 0.0312 | 19.4 | 77.44 | 310 | -- | -- |
| 79.32 | 0.416 | 2.89 | 0.0571 | -- | -- | -- | -- | 0.0356 | -- | -- | -- | -- | -- |
| 78.84 | 0.415 | 2.9 | -- | 0.0943 | -- | -- | -- | 0.0282 | 0.275 | -- | -- | -- | -- |
| 78.62 | 0.413 | 2.89 | -- | -- | -0.091 | -- | -- | 0.0233 | -- | 81 | 160 | -- | -- |
| 79.4 | 0.416 | 2.9 | -- | -- | -- | -- | -- | 0.0293 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.67 | wind | 3.0 | 90 | < th | dose dependent | rect. | 22 | 1 |
| 2 | 74.88 | wind | 3.0 | 90 | < th | dose independent | rect. | 22 | 1 |
| 5 | 75.40 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 22 | 1 |
| 8 | 75.60 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 22 | 1 |
| 9 | 75.65 | humidity | 80.0 | 90 | > th | dose independent | rect. | 22 | 1 |
| 10 | 75.65 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 11 | 75.68 | wind | 9.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 12 | 75.68 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 15 | 75.68 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 19 | 75.68 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 29 | 75.68 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 30 | 75.68 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 50 | 75.68 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 53 | 75.68 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 59 | 75.70 | humidity | 90.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 61 | 75.70 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 65 | 75.72 | temperature | 25.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 72 | 75.75 | wind | 1.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 76 | 75.75 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 80 | 75.76 | wind | 7.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 83 | 75.76 | temperature | 10.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 85 | 75.76 | temperature | 30.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 86 | 75.76 | humidity | 50.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 89 | 75.76 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 91 | 75.76 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 93 | 75.76 | radiation | 1.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 98 | 75.76 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 101 | 75.76 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 102 | 75.76 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 115 | 75.78 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 22 | 1 |
| 116 | 75.78 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 119 | 75.78 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 124 | 75.81 | wind | 1.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 125 | 75.81 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 126 | 75.83 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 131 | 75.85 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 134 | 75.87 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 23 | 23 |
| 136 | 75.87 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 204 | 76.01 | radiation | 30.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 240 | 76.10 | wind | 9.0 | 90 | < th | dose independent | rect. | 23 | 23 |
| 268 | 76.29 | wind | 3.0 | 30 | < th | dose independent | rect. | 20 | 4 |
| 278 | 76.39 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 23 | 23 |
| 302 | 76.50 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 305 | 76.50 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 322 | 76.58 | humidity | 80.0 | 270 | > th | dose independent | rect. | 19 | 2 |
| 344 | 76.64 | wind | 3.0 | 30 | < th | dose independent | rect. | 11 | 13 |
| 351 | 76.66 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 21 | 8 |
| 378 | 76.69 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 24 | 22 |
| 431 | 76.76 | wind | 5.0 | 30 | < th | dose dependent | rect. | 17 | 7 |
| 470 | 76.78 | radiation | 20.0 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 515 | 76.81 | wind | 5.0 | 30 | < th | dose dependent | rect. | 11 | 13 |
| 558 | 76.82 | humidity | 50.0 | 10 | > th | dose independent | rect. | 24 | 22 |
| 592 | 76.85 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 18 | 6 |
| 608 | 76.87 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 18 | 5 |
| 626 | 76.89 | wind | 9.0 | 30 | < th | dose dependent | rect. | 11 | 13 |
| 627 | 76.90 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 5 | 15 |
| 630 | 76.90 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 5 | 15 |
| 657 | 76.92 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 1 | 10 |
| 702 | 76.94 | temperature | 25.0 | 10 | > th | dose independent | rect. | 22 | 8 |
| 703 | 76.94 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 24 | 11 |
| 708 | 76.94 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 24 | 11 |
| 710 | 76.94 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 4 | 20 |
| 721 | 76.96 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 14 | 3 |
| 724 | 76.96 | wind | 7.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 769 | 77.00 | radiation | 10.0 | 720 | < th | dose independent | rect. | 17 | 6 |
| 772 | 77.00 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 21 | 8 |
| 783 | 77.01 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 8 | 9 |
| 784 | 77.01 | temperature | 15.0 | 10 | > th | dose independent | rect. | 24 | 11 |
| 785 | 77.01 | humidity | 60.0 | 90 | > th | dose independent | rect. | 24 | 11 |
| 794 | 77.01 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 8 | 9 |
| 797 | 77.02 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 798 | 77.02 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 812 | 77.02 | humidity | 80.0 | 10 | > th | dose independent | rect. | 11 | 13 |
| 829 | 77.03 | wind | 7.0 | 10 | < th | dose independent | rect. | 24 | 11 |
| 832 | 77.03 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 24 | 11 |
| 834 | 77.03 | wind | 9.0 | 30 | < th | dose independent | rect. | 11 | 13 |
| 835 | 77.03 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 11 | 13 |
| 837 | 77.03 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 23 | 18 |
| 842 | 77.03 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 11 | 13 |
| 844 | 77.03 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 23 | 18 |
| 847 | 77.04 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 1 | 11 |
| 852 | 77.04 | humidity | 50.0 | 10 | > th | dose independent | rect. | 24 | 11 |
| 854 | 77.04 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 1 | 11 |
| 855 | 77.04 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 24 | 11 |
| 858 | 77.04 | temperature | 10.0 | 10 | > th | dose independent | rect. | 11 | 13 |
| 860 | 77.04 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 12 | 13 |
| 863 | 77.04 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 20 |
| 865 | 77.04 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 873 | 77.04 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 18 | 11 |
| 874 | 77.04 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 18 | 11 |
| 875 | 77.05 | radiation | 1.0 | 30 | < th | dose independent | rect. | 4 | 20 |
| 890 | 77.06 | humidity | 80.0 | 10 | > th | dose independent | rect. | 8 | 16 |
| 899 | 77.07 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 919 | 77.08 | radiation | 40.0 | 90 | < th | dose independent | rect. | 11 | 13 |
| 929 | 77.09 | wind | 7.0 | 90 | > th | dose independent | rect. | 14 | 1 |
| 955 | 77.11 | humidity | 80.0 | 10 | > th | dose independent | rect. | 18 | 6 |
| 956 | 77.11 | humidity | 80.0 | 10 | > th | dose independent | rect. | 16 | 8 |
| 957 | 77.11 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 11 | 13 |
| 977 | 77.12 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 11 | 8 |
| 983 | 77.12 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 13 | 22 |
| 993 | 77.12 | wind | 9.0 | 30 | < th | dose dependent | rect. | 24 | 11 |
| 997 | 77.12 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 13 | 22 |