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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0776400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.85 (0.0389) R2 : 0.119
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.21 (0.155) R2dE : 0.124 R2E : 0.107
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.181 (0.0834) R2dN8 : 0.0123 R2N8 : -0.0052
σ : 0.727
deviance : 243.53
__
_____
C
peak time of C : --
E
wheather : humidity
threshold : 75.94
memory length : 2752
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
221.36 0.699 4.88 -0.683 0.237 -0.964 -0.548 -3.66 -0.0146 16.1 68 5530 -- --
237.02 0.717 4.87 -0.76 0.345 -1.31 -0.646 -- 0.0959 16.1 69 7605 -- --
221.98 0.694 4.89 -0.679 0.245 -0.975 -- -3.66 -0.0127 17.1 68 5529 -- --
236.8 0.717 4.86 -0.731 0.38 -1.18 -- -- 0.17 16.5 70 7626 -- --
225.15 0.699 4.88 -0.7 -- -0.999 -- -3.63 -0.0241 -- 67.97 5529 -- --
262.32 0.759 4.9 -0.561 0.299 -- -0.34 -- -0.0134 15.9 -- -- -- --
262.64 0.759 4.9 -0.566 0.299 -- -- -- -0.0153 16.1 -- -- -- --
240.68 0.723 4.84 -0.746 -- -1.14 -- -- 0.217 -- 69 8369 -- --
241.44 0.724 4.84 -- 0.212 -1.17 -- -- 0.2 15.8 75 2799 -- --
267.51 0.764 4.9 -0.578 -- -- -- -- -0.0232 -- -- -- -- --
271.08 0.77 4.88 -- 0.31 -- -- -- 0.0478 16 -- -- -- --
243.53 0.727 4.85 -- -- -1.21 -- -- 0.181 -- 75.94 2752 -- --
276.32 0.776 4.88 -- -- -- -- -- 0.0409 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 211.88 temperature 30.0 270 < th dose dependent rect. 1 5
5 215.52 temperature 25.0 270 < th dose independent rect. 1 5
8 216.45 temperature 30.0 90 < th dose dependent rect. 3 4
13 217.96 precipitation 0.1 4320 < th dose independent rect. 5 2
14 217.96 precipitation 0.1 4320 < th dose dependent rect. 5 2
19 218.94 precipitation 0.1 270 < th dose independent rect. 1 5
20 218.94 precipitation 0.1 270 < th dose dependent rect. 1 5
23 219.52 temperature 30.0 270 < th dose dependent rect. 3 1
28 219.80 wind 1.0 270 > th dose independent rect. 1 5
37 220.33 temperature 30.0 270 < th dose independent rect. 6 7
38 220.44 temperature 15.0 90 > th dose dependent rect. 21 6
45 220.74 temperature 10.0 270 > th dose dependent rect. 19 6
46 220.85 wind 7.0 270 < th dose independent rect. 1 5
49 221.06 atmosphere 1010.0 270 < th dose independent rect. 1 5
51 221.13 temperature 10.0 270 > th dose independent rect. 1 5
54 221.13 humidity 50.0 270 > th dose independent rect. 1 5
57 221.13 atmosphere 995.0 270 > th dose independent rect. 1 5
59 221.13 radiation 20.0 270 < th dose independent rect. 1 5
62 221.13 temperature 10.0 270 > th dose independent rect. 6 19
68 221.35 precipitation 0.1 4320 > th dose independent rect. 5 2
69 221.36 precipitation 0.1 14400 > th dose independent rect. 17 1
71 221.42 radiation 40.0 270 < th dose dependent rect. 1 5
77 221.55 wind 3.0 14400 < th dose independent rect. 3 1
78 221.55 wind 9.0 270 < th dose independent rect. 6 19
79 221.58 wind 1.0 270 > th dose independent rect. 12 18
85 221.67 precipitation 0.1 4320 > th dose dependent rect. 5 2
89 221.79 precipitation 0.1 270 < th dose independent rect. 1 16
90 221.79 precipitation 0.1 270 < th dose dependent rect. 1 16
100 222.12 precipitation 0.1 270 < th dose independent rect. 13 17
101 222.12 precipitation 0.1 270 < th dose dependent rect. 13 17
104 222.33 wind 3.0 14400 > th dose independent rect. 3 1
117 222.68 precipitation 0.1 270 < th dose independent rect. 3 1
119 222.68 precipitation 0.1 270 < th dose dependent rect. 3 1
122 222.75 temperature 20.0 270 > th dose independent rect. 6 19
146 223.26 temperature 30.0 270 < th dose independent rect. 20 16
169 223.50 precipitation 0.1 4320 < th dose independent rect. 3 14
170 223.50 precipitation 0.1 4320 < th dose dependent rect. 3 14
171 223.55 wind 9.0 270 < th dose dependent rect. 17 8
174 223.64 wind 1.0 4320 > th dose independent rect. 17 2
175 223.65 temperature 20.0 270 > th dose independent rect. 19 6
184 223.75 precipitation 0.1 4320 > th dose independent rect. 3 14
188 223.81 precipitation 0.1 270 < th dose independent rect. 6 19
189 223.81 precipitation 0.1 270 < th dose dependent rect. 6 19
193 223.85 wind 1.0 270 > th dose independent rect. 11 9
200 223.92 humidity 50.0 270 > th dose independent rect. 6 19
206 224.06 wind 9.0 14400 < th dose independent rect. 5 6
220 224.18 precipitation 0.1 4320 < th dose independent rect. 1 16
221 224.18 precipitation 0.1 4320 < th dose dependent rect. 1 16
227 224.27 precipitation 0.1 4320 > th dose independent rect. 1 16
233 224.35 temperature 15.0 10 > th dose dependent rect. 21 7
235 224.39 radiation 20.0 270 < th dose dependent rect. 17 8
247 224.55 precipitation 0.1 14400 < th dose independent rect. 17 1
248 224.55 precipitation 0.1 14400 < th dose dependent rect. 17 1
252 224.61 wind 1.0 14400 > th dose dependent rect. 3 1
253 224.61 humidity 50.0 270 > th dose dependent rect. 17 8
260 224.67 wind 5.0 14400 < th dose dependent rect. 3 2
262 224.68 radiation 10.0 270 < th dose independent rect. 17 8
263 224.69 wind 5.0 90 < th dose independent rect. 3 4
267 224.74 humidity 50.0 270 > th dose independent rect. 17 8
268 224.75 humidity 80.0 1440 < th dose independent rect. 11 1
277 224.85 precipitation 0.1 90 < th dose independent rect. 3 18
279 224.85 precipitation 0.1 90 < th dose dependent rect. 3 18
280 224.86 temperature 10.0 270 > th dose independent rect. 6 7
281 224.86 atmosphere 995.0 270 > th dose independent rect. 6 7
282 224.86 atmosphere 1015.0 270 < th dose independent rect. 6 7
283 224.86 temperature 10.0 270 > th dose independent rect. 13 17
284 224.87 wind 9.0 270 < th dose independent rect. 13 17
285 224.88 wind 9.0 270 < th dose independent rect. 17 8
287 224.91 wind 9.0 270 < th dose independent rect. 1 16
289 224.91 radiation 1.0 270 < th dose dependent rect. 7 18
298 224.97 wind 9.0 270 < th dose independent rect. 6 7
301 225.01 precipitation 0.1 270 < th dose independent rect. 6 7
302 225.01 precipitation 0.1 270 < th dose dependent rect. 6 7
303 225.03 temperature 10.0 270 > th dose independent rect. 17 8
307 225.03 temperature 10.0 270 > th dose independent rect. 1 16
308 225.03 atmosphere 1015.0 270 < th dose independent rect. 1 16
313 225.06 precipitation 0.1 4320 > th dose dependent rect. 1 16
323 225.16 humidity 80.0 1440 > th dose dependent rect. 7 2
326 225.18 humidity 80.0 14400 > th dose independent rect. 9 2
330 225.20 humidity 90.0 14400 > th dose dependent rect. 7 1
336 225.25 humidity 90.0 14400 > th dose independent rect. 7 1
338 225.26 humidity 70.0 90 > th dose independent rect. 3 4
358 225.37 humidity 80.0 1440 > th dose dependent rect. 6 6
360 225.39 temperature 10.0 270 > th dose independent rect. 2 3
363 225.39 humidity 50.0 270 > th dose independent rect. 2 3
366 225.39 atmosphere 995.0 270 > th dose independent rect. 2 3
369 225.39 radiation 20.0 270 < th dose independent rect. 2 3
373 225.39 temperature 10.0 270 > th dose independent rect. 5 21
374 225.40 radiation 40.0 270 < th dose dependent rect. 2 3
376 225.41 radiation 20.0 270 < th dose dependent rect. 2 3
379 225.43 radiation 1.0 270 < th dose independent rect. 2 3
437 225.62 atmosphere 995.0 270 > th dose independent rect. 1 16
455 225.71 humidity 80.0 1440 < th dose independent rect. 3 9
457 225.71 atmosphere 995.0 270 > th dose independent rect. 13 17
463 225.74 humidity 70.0 14400 < th dose dependent rect. 12 1
468 225.75 temperature 30.0 270 < th dose independent rect. 18 7
473 225.77 precipitation 0.1 10 < th dose independent rect. 3 5
475 225.77 precipitation 0.1 10 < th dose dependent rect. 3 5
484 225.81 wind 9.0 270 < th dose independent rect. 5 21
500 225.85 radiation 1.0 270 < th dose independent rect. 7 18
566 225.97 humidity 80.0 1440 > th dose independent rect. 3 9
577 225.99 humidity 90.0 14400 > th dose dependent rect. 16 1
583 226.00 atmosphere 1015.0 270 < th dose independent rect. 6 19
587 226.02 humidity 60.0 14400 < th dose independent rect. 11 7
590 226.03 temperature 30.0 270 < th dose independent rect. 6 19
600 226.09 wind 1.0 270 > th dose independent rect. 1 17
603 226.10 humidity 80.0 1440 > th dose independent rect. 11 1
637 226.17 atmosphere 995.0 270 > th dose independent rect. 18 7
646 226.19 temperature 20.0 270 > th dose independent rect. 19 17
654 226.20 wind 9.0 90 < th dose dependent rect. 21 6
660 226.23 precipitation 0.1 270 < th dose independent rect. 11 9
661 226.23 precipitation 0.1 270 < th dose dependent rect. 11 9
666 226.26 precipitation 0.1 14400 < th dose independent rect. 1 19
668 226.26 precipitation 0.1 14400 < th dose dependent rect. 1 19
676 226.28 precipitation 0.1 14400 > th dose independent rect. 24 20
678 226.29 radiation 1.0 4320 > th dose independent rect. 6 6
681 226.31 radiation 1.0 4320 < th dose independent rect. 6 7
682 226.32 atmosphere 995.0 270 > th dose independent rect. 6 19
692 226.35 precipitation 0.1 270 < th dose independent rect. 17 8
695 226.35 precipitation 0.1 270 < th dose dependent rect. 17 8
701 226.39 humidity 50.0 90 > th dose dependent rect. 21 6
710 226.41 wind 9.0 90 < th dose dependent rect. 3 4
711 226.43 wind 3.0 14400 < th dose independent rect. 24 5
712 226.43 precipitation 0.1 14400 > th dose dependent rect. 18 1
713 226.44 radiation 1.0 4320 > th dose independent rect. 6 3
720 226.45 humidity 70.0 14400 > th dose dependent rect. 10 1
721 226.46 precipitation 0.1 14400 > th dose independent rect. 15 1
727 226.46 precipitation 0.1 14400 > th dose dependent rect. 15 1
732 226.47 precipitation 0.1 14400 < th dose independent sin 2 NA
735 226.47 precipitation 0.1 14400 < th dose dependent sin 2 NA
740 226.48 humidity 70.0 14400 < th dose dependent rect. 11 21
746 226.49 humidity 70.0 14400 < th dose dependent rect. 11 8
749 226.50 precipitation 0.1 14400 < th dose independent rect. 15 1
750 226.50 precipitation 0.1 14400 < th dose dependent rect. 15 1
756 226.52 precipitation 0.1 14400 > th dose independent sin 2 NA
761 226.52 humidity 70.0 14400 < th dose dependent rect. 11 11
795 226.57 wind 9.0 270 < th dose dependent rect. 6 19
800 226.59 humidity 60.0 14400 < th dose independent sin 17 NA
824 226.66 humidity 80.0 14400 > th dose independent rect. 8 6
873 226.73 wind 9.0 270 < th dose dependent rect. 1 5
876 226.74 humidity 90.0 14400 < th dose independent rect. 7 1
881 226.75 humidity 50.0 270 > th dose dependent rect. 1 5
884 226.76 radiation 1.0 4320 < th dose independent rect. 6 3
904 226.78 humidity 90.0 14400 > th dose dependent rect. 6 15
958 226.95 humidity 70.0 1440 > th dose independent rect. 9 3
999 227.04 humidity 60.0 14400 > th dose independent rect. 14 4