Os02g0774800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0774800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57.98 | 0.358 | 3.07 | -0.515 | 0.0828 | 0.767 | -0.0288 | -7.26 | -0.0592 | 7.77 | 30.62 | 16 | -- | -- |
| 62.7 | 0.369 | 3.03 | -0.0316 | 0.095 | -0.102 | -0.0694 | -- | -0.0621 | 8.15 | 32.1 | 91 | -- | -- |
| 57.98 | 0.357 | 3.07 | -0.502 | 0.0826 | 0.772 | -- | -7.26 | -0.0591 | 7.75 | 30.62 | 16 | -- | -- |
| 62.69 | 0.369 | 3.03 | -0.0526 | 0.0848 | -0.11 | -- | -- | -0.0727 | 8.06 | 32.08 | 93 | -- | -- |
| 58.34 | 0.358 | 3.08 | -0.505 | -- | 0.768 | -- | -7.35 | -0.0588 | -- | 30.62 | 16 | -- | -- |
| 62.87 | 0.372 | 3.03 | -0.0634 | 0.0905 | -- | -0.0575 | -- | -0.0658 | 8.27 | -- | -- | -- | -- |
| 62.88 | 0.371 | 3.03 | -0.0652 | 0.0909 | -- | -- | -- | -0.0659 | 8.17 | -- | -- | -- | -- |
| 63.04 | 0.37 | 3.03 | -0.0546 | -- | -0.134 | -- | -- | -0.072 | -- | 32.02 | 115 | -- | -- |
| 62.77 | 0.369 | 3.03 | -- | 0.0824 | -0.119 | -- | -- | -0.0641 | 8.3 | 32 | 91 | -- | -- |
| 63.34 | 0.372 | 3.03 | -0.0645 | -- | -- | -- | -- | -0.0648 | -- | -- | -- | -- | -- |
| 63 | 0.371 | 3.03 | -- | 0.0905 | -- | -- | -- | -0.0586 | 8.22 | -- | -- | -- | -- |
| 63.11 | 0.37 | 3.03 | -- | -- | -0.139 | -- | -- | -0.0664 | -- | 32.02 | 128 | -- | -- |
| 63.45 | 0.372 | 3.03 | -- | -- | -- | -- | -- | -0.0576 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.80 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 35 | 58.09 | temperature | 30.0 | 90 | > th | dose independent | rect. | 11 | 1 |
| 36 | 58.13 | temperature | 30.0 | 10 | > th | dose independent | rect. | 11 | 1 |
| 99 | 58.49 | temperature | 30.0 | 10 | > th | dose dependent | sin | 7 | NA |
| 147 | 58.88 | humidity | 80.0 | 30 | < th | dose independent | rect. | 1 | 5 |
| 151 | 58.88 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 1 | 5 |
| 172 | 58.92 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 174 | 58.93 | radiation | 20.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 183 | 59.02 | temperature | 30.0 | 10 | > th | dose independent | rect. | 14 | 22 |
| 205 | 59.10 | temperature | 30.0 | 30 | > th | dose independent | sin | 7 | NA |
| 247 | 59.24 | humidity | 80.0 | 30 | < th | dose independent | rect. | 1 | 3 |
| 253 | 59.24 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 1 | 3 |
| 257 | 59.25 | humidity | 80.0 | 30 | < th | dose independent | rect. | 1 | 1 |
| 278 | 59.25 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 1 | 1 |
| 314 | 59.45 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 14 | 23 |
| 331 | 59.60 | wind | 5.0 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 351 | 59.65 | temperature | 30.0 | 90 | < th | dose independent | sin | 8 | NA |
| 430 | 59.83 | wind | 5.0 | 720 | > th | dose independent | rect. | 4 | 1 |
| 432 | 59.83 | wind | 5.0 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 435 | 59.86 | wind | 9.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 499 | 59.96 | radiation | 20.0 | 30 | < th | dose independent | rect. | 10 | 3 |
| 503 | 59.98 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 543 | 60.13 | wind | 5.0 | 10 | > th | dose independent | rect. | 11 | 1 |
| 582 | 60.17 | humidity | 90.0 | 720 | < th | dose independent | rect. | 3 | 2 |
| 598 | 60.18 | wind | 9.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 605 | 60.21 | wind | 5.0 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 607 | 60.21 | temperature | 30.0 | 10 | > th | dose dependent | no | NA | NA |
| 720 | 60.22 | wind | 5.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 729 | 60.22 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 10 | 3 |
| 731 | 60.23 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 733 | 60.23 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 739 | 60.25 | wind | 9.0 | 10 | > th | dose independent | rect. | 11 | 1 |
| 745 | 60.25 | wind | 3.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 795 | 60.36 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 812 | 60.39 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 825 | 60.42 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 4 | 1 |
| 848 | 60.45 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 10 | 2 |
| 908 | 60.49 | wind | 5.0 | 10 | > th | dose dependent | rect. | 23 | 13 |
| 910 | 60.50 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 971 | 60.57 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 975 | 60.57 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 15 | 1 |