Os02g0774700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os02g0774700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 142.02 | 0.56 | 9.47 | 0.673 | 0.909 | -1.95 | -0.191 | -0.393 | -0.37 | 8.82 | 21.56 | 2085 | -- | -- |
| 141.81 | 0.555 | 9.46 | 0.763 | 0.923 | -1.9 | -0.0573 | -- | -0.332 | 8.73 | 21.77 | 2097 | -- | -- |
| 141.74 | 0.554 | 9.46 | 0.688 | 0.913 | -1.88 | -- | -0.183 | -0.348 | 8.77 | 21.8 | 2097 | -- | -- |
| 141.82 | 0.555 | 9.46 | 0.744 | 0.911 | -1.88 | -- | -- | -0.337 | 8.77 | 21.76 | 2098 | -- | -- |
| 187.82 | 0.638 | 9.47 | 0.759 | -- | -2.01 | -- | -0.199 | -0.293 | -- | 21.7 | 2198 | -- | -- |
| 250.62 | 0.742 | 9.59 | -0.118 | 1.03 | -- | -0.107 | -- | -0.932 | 8.99 | -- | -- | -- | -- |
| 250.66 | 0.741 | 9.59 | -0.121 | 1.03 | -- | -- | -- | -0.932 | 8.98 | -- | -- | -- | -- |
| 187.93 | 0.638 | 9.47 | 0.818 | -- | -2 | -- | -- | -0.286 | -- | 21.74 | 2198 | -- | -- |
| 145.83 | 0.562 | 9.46 | -- | 0.986 | -1.53 | -- | -- | -0.427 | 8.19 | 22.21 | 1169 | -- | -- |
| 312.03 | 0.825 | 9.62 | -0.122 | -- | -- | -- | -- | -0.925 | -- | -- | -- | -- | -- |
| 251.05 | 0.741 | 9.58 | -- | 1.03 | -- | -- | -- | -0.918 | 8.98 | -- | -- | -- | -- |
| 180.27 | 0.625 | 9.5 | -- | -- | -1.62 | -- | -- | -0.431 | -- | 22.3 | 800 | -- | -- |
| 312.43 | 0.825 | 9.61 | -- | -- | -- | -- | -- | -0.912 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 147.96 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 13 |
| 14 | 148.73 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 25 | 149.15 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 33 | 149.30 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 39 | 149.45 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 42 | 149.55 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 52 | 149.80 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 71 | 150.21 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 89 | 150.59 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 104 | 150.73 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 126 | 151.18 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 141 | 151.41 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 194 | 152.24 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 3 |
| 280 | 153.55 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 287 | 153.68 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 291 | 153.74 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 353 | 154.58 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 363 | 154.77 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 364 | 154.80 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 23 |
| 536 | 156.72 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 13 |
| 645 | 157.67 | temperature | 20 | 4320 | > th | dose independent | sin | 16 | NA |
| 667 | 157.86 | temperature | 20 | 4320 | < th | dose independent | sin | 16 | NA |
| 688 | 157.99 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 13 |
| 783 | 158.75 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 930 | 159.99 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |