Os02g0774600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
FiT-DB / Search/ Help/ Sample detail
|
Os02g0774600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description :
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 123.64 | 0.522 | 2.99 | -0.329 | 0.0452 | -0.476 | 0.395 | 1.98 | -0.0584 | 12.7 | 1 | 10 | -- | -- |
| 126.97 | 0.529 | 2.98 | -0.252 | 0.00224 | -0.304 | 0.642 | -- | -0.0464 | 14.3 | 1 | 10 | -- | -- |
| 124.18 | 0.519 | 2.98 | -0.292 | 0.0571 | -0.46 | -- | 2.06 | -0.0447 | 10.2 | 1.067 | 9 | -- | -- |
| 128.06 | 0.531 | 2.97 | -0.233 | 0.0905 | -0.278 | -- | -- | -0.0442 | 7.85 | 1 | 10 | -- | -- |
| 124.38 | 0.519 | 2.99 | -0.318 | -- | -0.461 | -- | 2.13 | -0.0588 | -- | 1.054 | 9 | -- | -- |
| 129.91 | 0.534 | 2.98 | -0.215 | 0.121 | -- | -0.629 | -- | -0.0515 | 3.99 | -- | -- | -- | -- |
| 130.66 | 0.535 | 2.97 | -0.207 | 0.148 | -- | -- | -- | -0.0481 | 6.19 | -- | -- | -- | -- |
| 128.49 | 0.53 | 2.98 | -0.234 | -- | -0.296 | -- | -- | -0.0428 | -- | 1 | 10 | -- | -- |
| 129.47 | 0.533 | 2.97 | -- | 0.0915 | -0.261 | -- | -- | -0.0187 | 7.87 | 1 | 4 | -- | -- |
| 131.8 | 0.536 | 2.98 | -0.203 | -- | -- | -- | -- | -0.0448 | -- | -- | -- | -- | -- |
| 131.79 | 0.537 | 2.97 | -- | 0.145 | -- | -- | -- | -0.025 | 6.26 | -- | -- | -- | -- |
| 129.92 | 0.533 | 2.97 | -- | -- | -0.279 | -- | -- | -0.0172 | -- | 1 | 4 | -- | -- |
| 132.88 | 0.538 | 2.97 | -- | -- | -- | -- | -- | -0.0223 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 115.00 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 3 |
| 5 | 117.77 | wind | 3.0 | 10 | < th | dose dependent | rect. | 2 | 2 |
| 9 | 118.46 | wind | 1.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 10 | 118.46 | wind | 1.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 18 | 118.75 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 1 |
| 22 | 118.75 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 26 | 118.76 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 27 | 119.08 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 7 |
| 50 | 120.01 | wind | 3.0 | 90 | < th | dose independent | rect. | 4 | 20 |
| 62 | 120.57 | temperature | 30.0 | 10 | < th | dose independent | rect. | 4 | 22 |
| 63 | 120.62 | wind | 5.0 | 90 | < th | dose dependent | rect. | 4 | 20 |
| 80 | 121.00 | wind | 9.0 | 90 | < th | dose dependent | rect. | 4 | 21 |
| 92 | 121.18 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 23 |
| 96 | 121.21 | wind | 5.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 131 | 121.64 | wind | 1.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 157 | 121.94 | temperature | 10.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 159 | 121.94 | temperature | 30.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 160 | 121.94 | humidity | 50.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 163 | 121.94 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 164 | 121.94 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 166 | 121.94 | radiation | 1.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 171 | 121.94 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 2 | 1 |
| 172 | 121.94 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 23 |
| 173 | 121.94 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 178 | 121.94 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 181 | 121.95 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 23 |
| 198 | 122.07 | wind | 1.0 | 10 | < th | dose dependent | rect. | 2 | 7 |
| 201 | 122.11 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 10 | 18 |
| 207 | 122.14 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 1 | 2 |
| 208 | 122.15 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 23 |
| 213 | 122.15 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 215 | 122.17 | wind | 7.0 | 270 | < th | dose independent | rect. | 13 | 10 |
| 220 | 122.19 | wind | 1.0 | 10 | > th | dose independent | rect. | 13 | 23 |
| 223 | 122.22 | wind | 3.0 | 90 | < th | dose independent | rect. | 4 | 9 |
| 226 | 122.26 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 229 | 122.29 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 11 |
| 233 | 122.30 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 237 | 122.31 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 283 | 122.46 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 1 | 3 |
| 293 | 122.53 | temperature | 20.0 | 10 | > th | dose independent | rect. | 2 | 2 |
| 321 | 122.58 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 14 |
| 336 | 122.60 | wind | 3.0 | 90 | < th | dose independent | rect. | 4 | 15 |
| 350 | 122.64 | wind | 1.0 | 10 | > th | dose independent | rect. | 16 | 16 |
| 352 | 122.66 | wind | 1.0 | 10 | > th | dose independent | sin | 10 | NA |
| 355 | 122.66 | wind | 5.0 | 90 | < th | dose dependent | rect. | 4 | 9 |
| 374 | 122.71 | wind | 1.0 | 10 | > th | dose independent | rect. | 16 | 18 |
| 410 | 122.86 | wind | 1.0 | 10 | > th | dose independent | rect. | 13 | 21 |
| 420 | 122.88 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 449 | 122.90 | wind | 1.0 | 90 | > th | dose independent | rect. | 3 | 22 |
| 465 | 122.91 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 1 | 3 |
| 483 | 122.92 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 21 |
| 487 | 122.92 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 23 |
| 502 | 122.95 | wind | 7.0 | 270 | < th | dose independent | rect. | 16 | 15 |
| 516 | 122.99 | wind | 5.0 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 521 | 123.00 | wind | 9.0 | 270 | < th | dose dependent | rect. | 13 | 9 |
| 523 | 123.01 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 1 | 3 |
| 526 | 123.03 | wind | 9.0 | 1440 | < th | dose independent | rect. | 2 | 3 |
| 527 | 123.03 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 2 | 3 |
| 530 | 123.03 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 2 | 3 |
| 534 | 123.03 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 2 | 3 |
| 543 | 123.03 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 2 | 3 |
| 544 | 123.03 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 2 | 3 |
| 557 | 123.03 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 21 |
| 590 | 123.05 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 1 | 3 |
| 597 | 123.07 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 602 | 123.08 | radiation | 40.0 | 90 | < th | dose independent | rect. | 11 | 17 |
| 630 | 123.18 | radiation | 20.0 | 10 | < th | dose independent | rect. | 10 | 18 |
| 651 | 123.23 | temperature | 30.0 | 10 | < th | dose independent | rect. | 4 | 11 |
| 652 | 123.23 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 14 |
| 666 | 123.30 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 23 | 14 |
| 698 | 123.36 | wind | 1.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 742 | 123.41 | wind | 9.0 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 819 | 123.50 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 10 |
| 827 | 123.50 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 10 |
| 829 | 123.51 | wind | 1.0 | 10 | < th | dose independent | sin | 8 | NA |
| 837 | 123.52 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 10 |
| 838 | 123.52 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 14 |
| 876 | 123.55 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 14 |
| 878 | 123.55 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 885 | 123.55 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 14 |
| 930 | 123.57 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 10 |
| 936 | 123.58 | radiation | 40.0 | 270 | < th | dose independent | rect. | 8 | 19 |
| 966 | 123.62 | humidity | 50.0 | 720 | > th | dose independent | rect. | 15 | 22 |
| 976 | 123.65 | humidity | 80.0 | 90 | > th | dose independent | rect. | 11 | 1 |
| 994 | 123.68 | wind | 1.0 | 10 | > th | dose independent | rect. | 22 | 12 |