Os02g0774300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Heat shock 70 kDa protein, mitochondrial precursor.
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Os02g0774300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Heat shock 70 kDa protein, mitochondrial precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.66 | 0.372 | 14.1 | 0.667 | 0.796 | -1.21 | 0.32 | -0.398 | 0.041 | 17.6 | 20.92 | 10 | -- | -- |
| 63.46 | 0.371 | 14.1 | 0.677 | 0.799 | -1.19 | 0.363 | -- | 0.0415 | 17.4 | 21.21 | 10 | -- | -- |
| 62.91 | 0.369 | 14.1 | 0.668 | 0.797 | -1.21 | -- | -0.409 | 0.0423 | 17.6 | 20.94 | 10 | -- | -- |
| 63.78 | 0.372 | 14.1 | 0.681 | 0.8 | -1.22 | -- | -- | 0.043 | 17.6 | 20.95 | 10 | -- | -- |
| 82.56 | 0.423 | 14.1 | 0.637 | -- | -1.41 | -- | -0.528 | -0.00797 | -- | 22.3 | 121 | -- | -- |
| 88.98 | 0.442 | 14.1 | 0.702 | 1.53 | -- | 0.583 | -- | 0.0603 | 14.1 | -- | -- | -- | -- |
| 90.27 | 0.445 | 14.1 | 0.719 | 1.53 | -- | -- | -- | 0.0637 | 14.1 | -- | -- | -- | -- |
| 83.62 | 0.426 | 14.1 | 0.624 | -- | -1.41 | -- | -- | -0.0332 | -- | 21.41 | 121 | -- | -- |
| 75.96 | 0.406 | 14.1 | -- | 0.779 | -1.18 | -- | -- | -0.0185 | 17.4 | 22.03 | 10 | -- | -- |
| 231.37 | 0.711 | 14.1 | 0.655 | -- | -- | -- | -- | 0.0274 | -- | -- | -- | -- | -- |
| 103.88 | 0.477 | 14.1 | -- | 1.52 | -- | -- | -- | -0.0164 | 14.1 | -- | -- | -- | -- |
| 93.84 | 0.451 | 14.1 | -- | -- | -1.43 | -- | -- | -0.105 | -- | 22.29 | 121 | -- | -- |
| 242.69 | 0.727 | 14.1 | -- | -- | -- | -- | -- | -0.0452 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 53.14 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 6 | 54.60 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 3 | 17 |
| 14 | 55.51 | radiation | 10.0 | 10 | < th | dose independent | rect. | 3 | 17 |
| 17 | 56.12 | radiation | 10.0 | 90 | < th | dose dependent | sin | 2 | NA |
| 22 | 56.31 | radiation | 10.0 | 10 | < th | dose dependent | sin | 0 | NA |
| 24 | 56.43 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 25 | 56.47 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 34 | 57.07 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 13 |
| 39 | 57.22 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 47 | 57.48 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 55 | 57.65 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 9 |
| 56 | 57.65 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 9 |
| 59 | 57.71 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 63 | 57.77 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 14 |
| 67 | 57.85 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 18 | 7 |
| 69 | 57.86 | temperature | 15.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 72 | 57.88 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 7 |
| 82 | 58.05 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 18 | 7 |
| 90 | 58.17 | radiation | 1.0 | 270 | < th | dose independent | rect. | 18 | 7 |
| 94 | 58.19 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 95 | 58.19 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 96 | 58.19 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 102 | 58.20 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 109 | 58.23 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 110 | 58.24 | humidity | 60.0 | 270 | > th | dose independent | rect. | 18 | 7 |
| 113 | 58.30 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 114 | 58.31 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 5 |
| 115 | 58.31 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 120 | 58.35 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 122 | 58.36 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 124 | 58.36 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 125 | 58.36 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 128 | 58.36 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 133 | 58.36 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 135 | 58.39 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 145 | 58.49 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 149 | 58.53 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 164 | 58.69 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 175 | 58.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 15 |
| 177 | 58.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 15 |
| 186 | 58.84 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 6 |
| 188 | 58.85 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 191 | 58.85 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 197 | 58.85 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 198 | 58.85 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 214 | 58.88 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 12 | 21 |
| 224 | 58.94 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 17 |
| 244 | 59.07 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 245 | 59.08 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 292 | 59.23 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 19 |
| 294 | 59.23 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 299 | 59.25 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 317 | 59.29 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 354 | 59.37 | radiation | 1.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 380 | 59.49 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 18 |
| 383 | 59.49 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 18 |
| 413 | 59.76 | radiation | 1.0 | 270 | < th | dose independent | sin | 4 | NA |
| 436 | 59.89 | radiation | 1.0 | 270 | > th | dose independent | sin | 4 | NA |
| 441 | 59.92 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 443 | 59.93 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 451 | 59.99 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 6 |
| 454 | 59.99 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 6 |
| 470 | 60.09 | wind | 1.0 | 270 | > th | dose independent | rect. | 10 | 10 |
| 471 | 60.10 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 3 | 6 |
| 495 | 60.19 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 17 |
| 496 | 60.19 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 17 |
| 530 | 60.32 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 543 | 60.38 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 17 |
| 580 | 60.46 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 20 | 7 |
| 587 | 60.48 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 595 | 60.51 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 10 | 23 |
| 604 | 60.57 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 3 | 12 |
| 638 | 60.71 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 709 | 61.06 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 17 |
| 717 | 61.09 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 761 | 61.25 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 791 | 61.29 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 799 | 61.32 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 802 | 61.33 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 17 |
| 803 | 61.33 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 17 |
| 825 | 61.41 | radiation | 10.0 | 10 | < th | dose independent | rect. | 3 | 11 |
| 839 | 61.45 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 17 |
| 841 | 61.45 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 17 |
| 873 | 61.49 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 20 | 7 |
| 878 | 61.51 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 20 | 7 |
| 937 | 61.58 | wind | 9.0 | 10 | < th | dose independent | rect. | 20 | 7 |
| 953 | 61.62 | temperature | 10.0 | 10 | > th | dose independent | rect. | 20 | 7 |
| 954 | 61.62 | temperature | 30.0 | 10 | < th | dose independent | rect. | 20 | 7 |
| 955 | 61.62 | humidity | 50.0 | 10 | > th | dose independent | rect. | 20 | 7 |
| 958 | 61.62 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 20 | 7 |
| 959 | 61.62 | radiation | 1.0 | 10 | < th | dose independent | rect. | 20 | 7 |
| 964 | 61.62 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 17 |
| 966 | 61.62 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 3 | 17 |
| 967 | 61.62 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 20 | 7 |
| 979 | 61.67 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 987 | 61.68 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 19 |