Os02g0774200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0774200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 165.81 | 0.605 | 8.13 | 0.0756 | 0.965 | -1.69 | -0.507 | 2.5 | 0.0261 | 11.8 | 9.194 | 89 | 9.18 | 19.3 |
| 173.4 | 0.613 | 8.15 | -0.0554 | 1 | -1.59 | -0.53 | -- | -0.0134 | 11.3 | 8.624 | 84 | 9.05 | 19.6 |
| 166.82 | 0.602 | 8.13 | 0.0516 | 0.956 | -1.73 | -- | 2.46 | 0.02 | 11.9 | 8.42 | 86 | 9.19 | 19.3 |
| 172.7 | 0.612 | 8.15 | -0.192 | 0.98 | -1.78 | -- | -- | -0.0392 | 11.8 | 6.873 | 121 | 8.53 | 19.8 |
| 195.64 | 0.651 | 8.13 | 0.0998 | -- | -1.97 | -- | 2.83 | 0.0716 | -- | 4.781 | 230 | 9.6 | 17.7 |
| 215.66 | 0.688 | 8.15 | -0.335 | 1.34 | -- | -1.51 | -- | -0.0886 | 8.69 | -- | -- | -- | -- |
| 222.87 | 0.699 | 8.15 | -0.381 | 1.33 | -- | -- | -- | -0.087 | 8.91 | -- | -- | -- | -- |
| 200.99 | 0.66 | 8.16 | -0.238 | -- | -1.95 | -- | -- | 0.0279 | -- | -9.555 | 381 | 7.3 | 19.3 |
| 172.72 | 0.612 | 8.16 | -- | 0.982 | -1.86 | -- | -- | -0.0341 | 11.8 | 7.05 | 118 | 8.53 | 20 |
| 324.53 | 0.842 | 8.19 | -0.382 | -- | -- | -- | -- | -0.0778 | -- | -- | -- | -- | -- |
| 226.7 | 0.704 | 8.14 | -- | 1.33 | -- | -- | -- | -0.0445 | 8.93 | -- | -- | -- | -- |
| 200.7 | 0.66 | 8.18 | -- | -- | -1.95 | -- | -- | -0.0189 | -- | -11.22 | 367 | 7.45 | 19.6 |
| 328.37 | 0.846 | 8.18 | -- | -- | -- | -- | -- | -0.0355 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 167.61 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 19 |
| 3 | 168.07 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 13 |
| 4 | 168.17 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 4 | 13 |
| 13 | 169.69 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 20 |
| 25 | 171.31 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 15 |
| 43 | 172.90 | humidity | 80.0 | 90 | > th | dose independent | rect. | 5 | 14 |
| 45 | 172.93 | humidity | 80.0 | 270 | > th | dose independent | rect. | 3 | 15 |
| 49 | 173.23 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 3 | 7 |
| 77 | 174.60 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 5 | 18 |
| 90 | 175.07 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 11 |
| 131 | 176.03 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 152 | 176.75 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 162 | 176.95 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 14 |
| 163 | 176.95 | radiation | 10.0 | 270 | > th | dose independent | rect. | 15 | 22 |
| 211 | 178.22 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 216 | 178.29 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 8 |
| 236 | 178.58 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 6 |
| 244 | 178.73 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 13 | 20 |
| 248 | 178.78 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 13 |
| 271 | 179.21 | radiation | 10.0 | 270 | < th | dose dependent | sin | 1 | NA |
| 313 | 179.82 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 5 | 6 |
| 316 | 179.84 | humidity | 80.0 | 90 | > th | dose independent | rect. | 5 | 6 |
| 333 | 180.01 | humidity | 80.0 | 270 | > th | dose independent | rect. | 3 | 6 |
| 334 | 180.02 | humidity | 80.0 | 90 | > th | dose independent | rect. | 5 | 18 |
| 338 | 180.08 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 348 | 180.23 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 353 | 180.28 | radiation | 20.0 | 90 | < th | dose independent | rect. | 5 | 6 |
| 357 | 180.29 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 365 | 180.40 | radiation | 10.0 | 270 | > th | dose independent | sin | 3 | NA |
| 388 | 180.62 | radiation | 30.0 | 270 | < th | dose dependent | sin | 4 | NA |
| 443 | 181.12 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 446 | 181.14 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 505 | 181.66 | radiation | 20.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 519 | 181.75 | wind | 7.0 | 90 | < th | dose independent | rect. | 9 | 20 |
| 562 | 182.12 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 20 |
| 563 | 182.12 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 564 | 182.13 | radiation | 10.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 572 | 182.21 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 589 | 182.36 | radiation | 10.0 | 270 | > th | dose independent | rect. | 8 | 5 |
| 591 | 182.38 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 598 | 182.42 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 2 | 6 |
| 599 | 182.43 | humidity | 80.0 | 270 | > th | dose independent | rect. | 4 | 3 |
| 642 | 182.83 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 645 | 182.85 | radiation | 10.0 | 270 | < th | dose independent | rect. | 4 | 3 |
| 653 | 182.92 | humidity | 60.0 | 90 | > th | dose dependent | sin | 0 | NA |
| 654 | 182.93 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 686 | 183.17 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 691 | 183.21 | humidity | 80.0 | 270 | > th | dose independent | sin | 2 | NA |
| 705 | 183.22 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 3 | 8 |
| 752 | 183.58 | wind | 7.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 768 | 183.63 | humidity | 80.0 | 270 | > th | dose independent | sin | 4 | NA |
| 773 | 183.65 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 4 |
| 774 | 183.65 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 778 | 183.68 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 780 | 183.68 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 781 | 183.68 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 783 | 183.68 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 784 | 183.68 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 786 | 183.68 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 797 | 183.74 | humidity | 80.0 | 270 | < th | dose independent | sin | 3 | NA |
| 839 | 183.94 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 19 |
| 842 | 183.95 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 18 |
| 885 | 184.04 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 911 | 184.12 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 4 |
| 921 | 184.16 | wind | 5.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 923 | 184.16 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 15 |
| 945 | 184.28 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 5 | 5 |
| 962 | 184.36 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 9 | 20 |
| 967 | 184.38 | radiation | 20.0 | 270 | < th | dose independent | rect. | 13 | 19 |
| 998 | 184.54 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 15 | 22 |