Os02g0771700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 17 protein.
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Os02g0771700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, family 17 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 742.19 | 1.28 | 10.2 | -5.02 | 4.12 | 2.83 | 0.743 | 12.7 | -2.08 | 5.16 | 40.88 | 5834 | 7.09 | -- |
| 925.51 | 1.42 | 9.9 | -5.38 | 4.15 | 2.84 | 1.79 | -- | -2.2 | 5.5 | 10.02 | 5473 | 7.57 | -- |
| 739.74 | 1.27 | 10.2 | -5.09 | 4.11 | 3.22 | -- | 13.8 | -2.1 | 5.16 | 41.66 | 5890 | 6.87 | -- |
| 921.84 | 1.41 | 9.97 | -5.43 | 4.12 | 2.78 | -- | -- | -2.28 | 5.28 | 10 | 5477 | 7.55 | -- |
| 1620.15 | 1.87 | 10.2 | -4.7 | -- | 3.46 | -- | 13.9 | -1.92 | -- | 41.6 | 5638 | 6.93 | -- |
| 1027.72 | 1.5 | 9.86 | -6.31 | 4.24 | -- | 0.876 | -- | -1.74 | 5.03 | -- | -- | -- | -- |
| 1029.64 | 1.5 | 9.87 | -6.31 | 4.25 | -- | -- | -- | -1.75 | 5 | -- | -- | -- | -- |
| 1023.22 | 1.49 | 9.91 | -3.87 | -- | 5.74 | -- | -- | -1.91 | -- | -52.79 | 6671 | 8.03 | -- |
| 1647.5 | 1.89 | 9.99 | -- | 4.26 | 3.83 | -- | -- | -2.35 | 5.15 | -0.001764 | 8550 | 7.19 | -- |
| 1977.98 | 2.08 | 9.91 | -6.15 | -- | -- | -- | -- | -1.64 | -- | -- | -- | -- | -- |
| 2078.75 | 2.13 | 9.71 | -- | 4.14 | -- | -- | -- | -1.05 | 5.05 | -- | -- | -- | -- |
| 1697.1 | 1.92 | 10 | -- | -- | 7.36 | -- | -- | -2.02 | -- | -27.58 | 6576 | 7.15 | -- |
| 2977.29 | 2.55 | 9.76 | -- | -- | -- | -- | -- | -0.958 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 689.39 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 2 | 690.54 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 4 | 691.61 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 9 |
| 13 | 695.04 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 14 | 696.40 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 15 | 696.77 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 53 | 713.71 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 55 | 722.01 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 18 | 13 |
| 56 | 723.35 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 73 | 740.90 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 15 | 16 |
| 87 | 743.69 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 89 | 743.86 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 18 | 9 |
| 91 | 744.12 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 14 | 13 |
| 96 | 744.23 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 102 | 744.44 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 16 | 14 |
| 108 | 744.77 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 116 | 745.20 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 125 | 745.47 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 128 | 745.56 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 16 | 16 |
| 175 | 747.80 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 180 | 747.80 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 14 | 4 |
| 185 | 748.13 | radiation | 10.0 | 14400 | < th | dose independent | sin | 14 | NA |
| 186 | 748.32 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 14 | 4 |
| 192 | 749.22 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 16 | 2 |
| 205 | 749.51 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 213 | 749.74 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 15 | 17 |
| 230 | 750.29 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 253 | 751.10 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 6 |
| 254 | 751.15 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 18 | 3 |
| 262 | 751.56 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 288 | 752.93 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 2 | 2 |
| 297 | 753.15 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 10 |
| 327 | 753.66 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 333 | 753.80 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 338 | 753.93 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 13 | NA |
| 344 | 754.06 | radiation | 30.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 345 | 754.09 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 6 |
| 365 | 754.45 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 11 | 7 |
| 366 | 754.45 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 11 | 7 |
| 372 | 754.51 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 8 |
| 391 | 754.91 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 397 | 754.96 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 13 |
| 399 | 754.96 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 17 |
| 411 | 755.04 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 412 | 755.09 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 429 | 755.12 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 11 | 7 |
| 430 | 755.13 | temperature | 30.0 | 14400 | < th | dose independent | sin | 14 | NA |
| 450 | 755.20 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 467 | 755.31 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 471 | 755.36 | temperature | 30.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 475 | 755.43 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 477 | 755.43 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 505 | 755.54 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 561 | 756.09 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 568 | 756.31 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 592 | 756.77 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 11 | 11 |
| 666 | 757.24 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 767 | 757.85 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 803 | 758.16 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 814 | 758.25 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 826 | 758.34 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 835 | 758.45 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 836 | 758.46 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 11 |
| 867 | 758.92 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 894 | 759.22 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 899 | 759.33 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 13 | 20 |
| 971 | 759.93 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 16 | 14 |