Os02g0771600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 1-aminocyclopropane-1-carboxylate oxidase (Fragment).
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Os02g0771600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 1-aminocyclopropane-1-carboxylate oxidase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.62 | 0.307 | 13.7 | -0.633 | 0.903 | -0.195 | -0.521 | 0.233 | 0.0941 | 23.1 | 1005 | 12 | -- | -- |
| 42.9 | 0.305 | 13.7 | -0.625 | 0.908 | -0.195 | -0.514 | -- | 0.0986 | 23 | 1005 | 80 | -- | -- |
| 43.75 | 0.308 | 13.7 | -0.612 | 0.906 | -0.193 | -- | 0.231 | 0.0962 | 23.1 | 1005 | 12 | -- | -- |
| 43.8 | 0.308 | 13.7 | -0.588 | 0.916 | -0.21 | -- | -- | 0.0974 | 23 | 1006 | 110 | -- | -- |
| 93.16 | 0.452 | 13.7 | -0.591 | -- | -0.242 | -- | 0.269 | 0.0949 | -- | 1005 | 5 | -- | -- |
| 45.93 | 0.318 | 13.7 | -0.629 | 0.903 | -- | -0.489 | -- | 0.18 | 23.2 | -- | -- | -- | -- |
| 46.94 | 0.321 | 13.7 | -0.61 | 0.905 | -- | -- | -- | 0.181 | 23.3 | -- | -- | -- | -- |
| 93.58 | 0.453 | 13.7 | -0.582 | -- | -0.235 | -- | -- | 0.104 | -- | 1005 | 3 | -- | -- |
| 53.38 | 0.34 | 13.7 | -- | 0.905 | -0.204 | -- | -- | 0.158 | 23 | 1006 | 110 | -- | -- |
| 98.16 | 0.463 | 13.7 | -0.587 | -- | -- | -- | -- | 0.19 | -- | -- | -- | -- | -- |
| 56.74 | 0.352 | 13.7 | -- | 0.899 | -- | -- | -- | 0.249 | 23.2 | -- | -- | -- | -- |
| 102.51 | 0.473 | 13.7 | -- | -- | -0.239 | -- | -- | 0.167 | -- | 1005 | 2 | -- | -- |
| 107.25 | 0.483 | 13.6 | -- | -- | -- | -- | -- | 0.255 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.46 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 2 | 38.54 | humidity | 80 | 43200 | < th | dose dependent | rect. | 18 | 8 |
| 4 | 38.56 | radiation | 30 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 24 | 38.61 | humidity | 80 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 27 | 38.64 | humidity | 80 | 43200 | > th | dose independent | rect. | 19 | 4 |
| 28 | 38.65 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 31 | 38.67 | humidity | 80 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 36 | 38.68 | humidity | 80 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 52 | 38.77 | humidity | 80 | 43200 | > th | dose independent | sin | 13 | NA |
| 54 | 38.78 | humidity | 80 | 43200 | < th | dose independent | sin | 13 | NA |
| 59 | 38.81 | humidity | 80 | 43200 | > th | dose independent | rect. | 15 | 18 |
| 61 | 38.82 | humidity | 80 | 43200 | < th | dose independent | rect. | 15 | 18 |
| 66 | 38.84 | humidity | 80 | 43200 | > th | dose independent | rect. | 15 | 16 |
| 73 | 38.85 | humidity | 80 | 43200 | < th | dose independent | rect. | 15 | 16 |
| 83 | 38.86 | humidity | 80 | 43200 | < th | dose dependent | sin | 12 | NA |
| 104 | 38.87 | temperature | 25 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 114 | 38.88 | radiation | 40 | 43200 | < th | dose dependent | rect. | 14 | 5 |
| 115 | 38.88 | temperature | 25 | 43200 | > th | dose dependent | rect. | 22 | 6 |
| 135 | 38.89 | temperature | 25 | 43200 | > th | dose dependent | rect. | 22 | 4 |
| 148 | 38.90 | temperature | 25 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 150 | 38.90 | radiation | 40 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 151 | 38.90 | temperature | 25 | 43200 | > th | dose dependent | rect. | 1 | 3 |
| 154 | 38.90 | radiation | 1 | 43200 | > th | dose dependent | rect. | 14 | 4 |
| 210 | 38.92 | radiation | 10 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 315 | 38.97 | radiation | 30 | 43200 | < th | dose dependent | sin | 15 | NA |
| 324 | 38.98 | temperature | 25 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 466 | 39.02 | radiation | 10 | 43200 | > th | dose independent | rect. | 15 | 16 |
| 469 | 39.02 | humidity | 90 | 43200 | < th | dose dependent | sin | 10 | NA |
| 473 | 39.02 | humidity | 90 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 489 | 39.03 | radiation | 10 | 43200 | > th | dose independent | sin | 14 | NA |
| 572 | 39.05 | radiation | 1 | 43200 | > th | dose dependent | sin | 15 | NA |
| 630 | 39.07 | wind | 1 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 680 | 39.08 | radiation | 10 | 43200 | > th | dose independent | rect. | 14 | 18 |
| 701 | 39.08 | radiation | 10 | 43200 | < th | dose dependent | rect. | 8 | 23 |
| 703 | 39.09 | radiation | 30 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 748 | 39.09 | radiation | 10 | 43200 | < th | dose dependent | rect. | 13 | 22 |
| 775 | 39.11 | radiation | 20 | 43200 | < th | dose independent | rect. | 12 | 3 |
| 776 | 39.11 | wind | 1 | 43200 | > th | dose independent | rect. | 7 | 7 |
| 782 | 39.11 | radiation | 10 | 43200 | < th | dose dependent | no | NA | NA |
| 799 | 39.11 | radiation | 10 | 43200 | < th | dose dependent | rect. | 5 | 14 |
| 911 | 39.12 | radiation | 10 | 43200 | < th | dose dependent | rect. | 16 | 23 |
| 933 | 39.13 | radiation | 10 | 43200 | < th | dose dependent | sin | 23 | NA |
| 956 | 39.14 | humidity | 50 | 43200 | > th | dose dependent | rect. | 4 | 1 |