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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0770500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to WRKY transcription factor 32.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.13 (0.044) R2 : 0.341
β1 : 2.49 (0.183) R2dD : 0.376 R2D : -0.0388
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.83 (0.197) R2dE : 0.186 R2E : -0.237
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.17 (0.101) R2dN8 : 0.318 R2N8 : 0.00599
σ : 0.803
deviance : 297.07
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 9.312
memory length : 5691
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
296.25 0.809 4.13 2.49 0.131 -1.82 -0.0769 -0.00897 1.18 16.8 7.413 5768 -- --
296.25 0.802 4.13 2.49 0.129 -1.82 -0.0769 -- 1.18 16.8 7.137 5758 -- --
296.26 0.802 4.13 2.49 0.129 -1.82 -- -0.000445 1.18 16.8 7.338 5758 -- --
296.26 0.802 4.13 2.49 0.129 -1.82 -- -- 1.18 16.8 6.997 5758 -- --
297.07 0.803 4.13 2.48 -- -1.83 -- -0.0278 1.17 -- 9.716 5692 -- --
351.51 0.879 4.22 1.62 0.187 -- -0.0118 -- 0.785 16.2 -- -- -- --
351.51 0.878 4.22 1.62 0.187 -- -- -- 0.785 16.2 -- -- -- --
297.07 0.803 4.13 2.49 -- -1.83 -- -- 1.17 -- 9.312 5691 -- --
391.22 0.921 4.29 -- 0.212 -0.904 -- -- 0.459 18.1 31.78 912 -- --
353.4 0.878 4.22 1.61 -- -- -- -- 0.78 -- -- -- -- --
420.3 0.959 4.26 -- 0.156 -- -- -- 0.605 16.4 -- -- -- --
393.1 0.923 4.29 -- -- -0.815 -- -- 0.458 -- 32.34 966 -- --
421.61 0.958 4.26 -- -- -- -- -- 0.601 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 283.71 humidity 70 43200 > th dose dependent rect. 8 5
2 283.81 humidity 70 43200 > th dose dependent rect. 17 2
3 283.90 humidity 80 43200 > th dose independent rect. 8 4
4 284.01 humidity 70 43200 > th dose dependent rect. 9 2
8 284.67 humidity 70 43200 > th dose dependent rect. 7 7
10 284.88 humidity 70 43200 > th dose dependent rect. 7 13
11 284.99 wind 5 43200 < th dose independent rect. 9 1
12 285.12 humidity 90 43200 > th dose dependent rect. 17 2
15 285.21 humidity 90 43200 > th dose dependent rect. 9 10
17 285.25 humidity 90 43200 > th dose dependent rect. 15 5
20 285.38 humidity 80 43200 < th dose independent rect. 8 5
22 285.47 wind 5 43200 > th dose independent rect. 9 1
28 285.59 wind 3 43200 > th dose dependent rect. 8 2
35 285.78 wind 5 43200 < th dose independent rect. 6 6
40 285.90 humidity 80 43200 < th dose independent rect. 9 2
41 285.90 wind 5 43200 > th dose independent rect. 6 6
54 286.11 humidity 80 43200 > th dose independent rect. 7 6
55 286.12 humidity 80 43200 > th dose independent rect. 7 14
73 286.40 wind 5 43200 < th dose independent rect. 8 3
82 286.52 wind 5 43200 > th dose independent rect. 8 3
99 286.68 wind 3 43200 > th dose dependent rect. 20 16
109 286.76 humidity 80 43200 < th dose independent rect. 8 13
124 286.95 humidity 90 43200 > th dose dependent rect. 9 4
151 287.13 humidity 90 43200 > th dose independent rect. 11 8
161 287.22 humidity 90 43200 > th dose independent rect. 9 7
163 287.23 humidity 90 43200 > th dose independent rect. 10 4
169 287.32 humidity 90 43200 > th dose independent rect. 9 9
172 287.34 wind 5 43200 < th dose independent sin 6 NA
178 287.39 wind 5 43200 < th dose independent rect. 19 18
187 287.45 wind 3 43200 > th dose dependent sin 7 NA
197 287.53 wind 5 43200 > th dose independent sin 6 NA
222 287.65 wind 5 43200 > th dose independent rect. 19 17
263 287.89 humidity 90 43200 > th dose dependent sin 21 NA
287 288.03 temperature 20 43200 > th dose independent rect. 15 5
292 288.05 humidity 90 43200 > th dose independent rect. 4 14
293 288.05 temperature 25 43200 < th dose dependent rect. 11 2
297 288.08 humidity 70 43200 > th dose dependent sin 23 NA
332 288.27 humidity 90 43200 < th dose independent rect. 11 8
335 288.30 humidity 90 43200 < th dose independent rect. 3 15
346 288.33 humidity 80 43200 > th dose dependent rect. 20 1
369 288.42 temperature 20 43200 > th dose independent rect. 12 8
390 288.52 humidity 90 43200 > th dose independent sin 23 NA
405 288.61 radiation 1 14400 < th dose independent rect. 21 9
420 288.65 radiation 1 14400 < th dose independent rect. 2 4
421 288.65 radiation 1 14400 < th dose independent rect. 24 6
431 288.68 radiation 1 43200 > th dose independent rect. 4 2
459 288.75 humidity 90 43200 < th dose independent rect. 12 1
484 288.80 humidity 80 43200 > th dose independent rect. 14 7
502 288.84 humidity 90 43200 < th dose independent rect. 7 11
600 289.14 temperature 20 43200 > th dose independent rect. 16 1
618 289.22 wind 9 43200 < th dose dependent rect. 8 3
620 289.23 humidity 90 43200 > th dose independent rect. 17 1
625 289.24 humidity 90 43200 < th dose independent rect. 7 1
626 289.24 humidity 90 43200 > th dose independent rect. 15 3
635 289.26 humidity 90 43200 < th dose independent sin 0 NA
647 289.29 wind 9 43200 < th dose dependent rect. 8 1
657 289.33 temperature 20 43200 > th dose independent rect. 19 1
668 289.35 humidity 90 43200 < th dose independent rect. 15 3
696 289.42 temperature 25 43200 < th dose dependent rect. 16 1
716 289.48 temperature 20 43200 < th dose independent rect. 15 5
747 289.57 temperature 20 43200 < th dose independent rect. 16 1
832 289.84 temperature 20 43200 < th dose independent rect. 12 9