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Os02g0770300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.0191) R2 : 0.392
β1 : -0.744 (0.0699) R2dD : 0.157 R2D : 0.132
β2 : 0.619 (0.0456) R2dC : 0.247 R2C : 0.238
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.097 (0.0407) R2dN8 : 0.0101 R2N8 : -0.00697
σ : 0.359
deviance : 58.69
__
_____
C
peak time of C : 22.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
50.86 0.335 11.4 -0.633 0.626 -0.764 -0.0826 -1.88 -0.115 22.7 1015 4427 -- --
51.55 0.334 11.4 -0.88 0.628 -0.374 -0.136 -- -0.202 22.6 1011 12453 -- --
50.89 0.332 11.4 -0.629 0.626 -0.771 -- -1.9 -0.115 22.7 1015 4422 -- --
51.51 0.334 11.4 -0.916 0.611 -0.39 -- -- -0.226 22.8 1011 12578 -- --
74.9 0.403 11.4 -0.674 -- -0.61 -- -1.2 -0.125 -- 1015 5651 -- --
58.63 0.359 11.4 -0.749 0.619 -- -0.12 -- -0.0973 22.8 -- -- -- --
58.69 0.359 11.4 -0.744 0.619 -- -- -- -0.097 22.8 -- -- -- --
74.94 0.403 11.4 -0.93 -- -0.405 -- -- -0.222 -- 1011 12472 -- --
71.52 0.394 11.4 -- 0.612 -0.193 -- -- -0.0693 22.7 1010 12106 -- --
82.41 0.424 11.4 -0.731 -- -- -- -- -0.0932 -- -- -- -- --
73.28 0.4 11.4 -- 0.613 -- -- -- -0.0141 22.7 -- -- -- --
94.64 0.453 11.4 -- -- -0.198 -- -- -0.0696 -- 1010 12334 -- --
96.52 0.459 11.4 -- -- -- -- -- -0.012 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 47.89 wind 9.0 14400 > th dose independent rect. 4 9
2 48.17 wind 9.0 14400 > th dose dependent rect. 11 2
12 48.80 wind 9.0 14400 > th dose independent rect. 11 2
14 48.88 humidity 80.0 14400 < th dose dependent rect. 6 1
21 49.22 wind 9.0 14400 < th dose independent rect. 3 11
23 49.23 wind 9.0 14400 < th dose independent rect. 4 9
29 49.32 wind 9.0 14400 > th dose dependent rect. 3 11
38 49.44 wind 9.0 14400 < th dose independent rect. 11 2
41 49.44 temperature 15.0 10 > th dose dependent rect. 7 22
55 49.71 temperature 25.0 270 < th dose independent rect. 24 21
57 49.74 wind 9.0 14400 > th dose independent sin 5 NA
67 49.85 temperature 25.0 270 < th dose independent sin 8 NA
77 49.93 humidity 80.0 14400 > th dose independent rect. 2 2
79 49.95 wind 9.0 14400 < th dose independent rect. 10 4
83 49.97 wind 9.0 14400 > th dose dependent sin 4 NA
119 50.19 wind 9.0 14400 > th dose dependent rect. 10 4
125 50.21 temperature 20.0 1440 > th dose dependent rect. 24 1
141 50.28 wind 3.0 43200 > th dose independent rect. 1 1
145 50.28 precipitation 0.1 43200 > th dose dependent rect. 20 3
164 50.37 temperature 20.0 270 > th dose dependent rect. 17 21
167 50.38 temperature 10.0 270 > th dose dependent rect. 6 20
171 50.39 temperature 20.0 270 > th dose dependent rect. 21 14
183 50.45 temperature 20.0 270 > th dose dependent rect. 20 17
193 50.51 humidity 80.0 14400 < th dose independent rect. 6 1
195 50.51 temperature 20.0 270 > th dose dependent sin 8 NA
205 50.55 atmosphere 1005.0 43200 > th dose independent rect. 2 1
208 50.56 wind 9.0 14400 < th dose independent sin 4 NA
209 50.56 atmosphere 1005.0 43200 < th dose independent rect. 22 1
232 50.63 temperature 10.0 270 > th dose dependent rect. 17 22
236 50.64 temperature 30.0 10 < th dose dependent rect. 5 18
245 50.68 atmosphere 1005.0 43200 < th dose independent rect. 2 1
252 50.70 temperature 25.0 270 > th dose independent sin 8 NA
253 50.70 humidity 80.0 14400 > th dose independent rect. 2 5
257 50.71 precipitation 0.1 43200 > th dose independent rect. 20 2
260 50.72 precipitation 0.1 43200 < th dose independent rect. 20 2
261 50.72 precipitation 0.1 43200 < th dose dependent rect. 20 2
289 50.78 atmosphere 1005.0 43200 < th dose independent rect. 22 5
292 50.78 temperature 20.0 4320 < th dose dependent rect. 1 1
297 50.79 atmosphere 1005.0 43200 < th dose independent rect. 11 1
317 50.82 atmosphere 1015.0 4320 > th dose dependent rect. 8 19
319 50.83 temperature 20.0 4320 > th dose independent rect. 22 1
329 50.84 atmosphere 1015.0 4320 > th dose dependent sin 19 NA
330 50.84 humidity 80.0 14400 < th dose dependent rect. 21 10
338 50.84 temperature 30.0 90 < th dose dependent rect. 1 22
344 50.85 temperature 25.0 90 < th dose independent rect. 3 19
345 50.85 temperature 25.0 270 > th dose independent rect. 17 22
359 50.86 wind 3.0 1440 < th dose dependent rect. 8 1
384 50.88 atmosphere 1015.0 4320 > th dose independent rect. 8 20
395 50.89 atmosphere 1015.0 4320 > th dose independent rect. 8 18
411 50.90 atmosphere 1015.0 4320 > th dose independent sin 20 NA
418 50.90 atmosphere 1015.0 4320 < th dose independent rect. 8 20
423 50.90 atmosphere 1015.0 4320 > th dose dependent no NA NA
431 50.90 atmosphere 1015.0 4320 > th dose dependent rect. 3 23
437 50.91 humidity 80.0 14400 < th dose independent rect. 2 2
441 50.91 radiation 10.0 4320 < th dose independent rect. 11 6
445 50.91 atmosphere 1015.0 4320 < th dose independent rect. 9 18
453 50.91 atmosphere 1015.0 4320 > th dose independent rect. 23 22
466 50.91 atmosphere 1015.0 4320 > th dose dependent rect. 15 22
467 50.91 atmosphere 1015.0 4320 > th dose dependent rect. 17 22
470 50.91 atmosphere 1015.0 4320 > th dose dependent rect. 22 22
471 50.91 atmosphere 1015.0 4320 > th dose dependent rect. 1 23
474 50.91 atmosphere 1015.0 4320 > th dose dependent rect. 13 23
486 50.92 temperature 20.0 1440 < th dose independent rect. 4 1
487 50.92 atmosphere 1005.0 43200 > th dose independent rect. 22 1
490 50.92 atmosphere 1005.0 43200 > th dose independent rect. 22 5
498 50.92 atmosphere 1015.0 4320 > th dose independent rect. 23 20
501 50.92 atmosphere 1015.0 4320 < th dose independent rect. 23 20
522 50.92 atmosphere 1015.0 4320 > th dose dependent rect. 17 20
546 50.93 atmosphere 1015.0 4320 > th dose independent no NA NA
547 50.93 atmosphere 1005.0 43200 > th dose independent rect. 11 1
555 50.93 atmosphere 1015.0 4320 < th dose independent rect. 23 18
608 50.94 atmosphere 1015.0 4320 < th dose independent no NA NA
609 50.94 temperature 20.0 1440 > th dose independent rect. 4 1
614 50.94 radiation 10.0 4320 < th dose independent rect. 11 12
629 50.94 radiation 10.0 4320 < th dose independent rect. 11 18
648 50.94 atmosphere 1015.0 4320 > th dose independent rect. 13 23
656 50.94 atmosphere 1015.0 4320 < th dose independent rect. 3 23
681 50.95 atmosphere 1015.0 4320 < th dose independent sin 19 NA
686 50.95 radiation 10.0 4320 < th dose independent rect. 11 8
720 50.95 atmosphere 1015.0 4320 > th dose independent rect. 17 21
726 50.95 temperature 25.0 270 < th dose independent rect. 10 22
738 50.95 atmosphere 1015.0 4320 < th dose independent rect. 17 22
747 50.95 atmosphere 1015.0 4320 < th dose independent rect. 13 23
825 50.97 atmosphere 1015.0 4320 > th dose independent rect. 23 14
851 50.97 atmosphere 1015.0 4320 < th dose independent rect. 19 19
880 50.98 atmosphere 1015.0 4320 < th dose independent sin 4 NA
881 50.98 atmosphere 1015.0 4320 < th dose independent rect. 9 2
890 50.98 temperature 25.0 270 > th dose independent rect. 22 16
933 50.99 atmosphere 1015.0 4320 > th dose independent sin 2 NA
989 51.00 atmosphere 1015.0 4320 > th dose independent rect. 9 2