Os02g0770100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0770100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.8 | 0.285 | 8.98 | 0.789 | 0.524 | -1.08 | 0.33 | 0.971 | 0.242 | 17.1 | 84.36 | 1114 | -- | -- |
| 37.95 | 0.287 | 8.99 | 0.735 | 0.511 | -1.03 | 0.182 | -- | 0.236 | 16.9 | 85.86 | 1132 | -- | -- |
| 37 | 0.283 | 8.98 | 0.784 | 0.523 | -1.08 | -- | 0.964 | 0.248 | 17 | 85 | 1099 | -- | -- |
| 37.94 | 0.287 | 8.99 | 0.7 | 0.518 | -0.973 | -- | -- | 0.234 | 16.6 | 85.09 | 1142 | -- | -- |
| 50.33 | 0.33 | 8.97 | 0.756 | -- | -1.16 | -- | 0.953 | 0.25 | -- | 86.86 | 1179 | -- | -- |
| 56.76 | 0.353 | 8.98 | 0.578 | 0.647 | -- | -0.123 | -- | 0.249 | 15.3 | -- | -- | -- | -- |
| 56.81 | 0.353 | 8.98 | 0.575 | 0.647 | -- | -- | -- | 0.248 | 15.3 | -- | -- | -- | -- |
| 51.08 | 0.333 | 8.98 | 0.678 | -- | -1.12 | -- | -- | 0.232 | -- | 87 | 1195 | -- | -- |
| 49.67 | 0.328 | 9 | -- | 0.495 | -0.951 | -- | -- | 0.209 | 16.5 | 110.6 | 1170 | -- | -- |
| 80.44 | 0.419 | 8.99 | 0.548 | -- | -- | -- | -- | 0.231 | -- | -- | -- | -- | -- |
| 65.53 | 0.379 | 9 | -- | 0.636 | -- | -- | -- | 0.184 | 15.3 | -- | -- | -- | -- |
| 62.03 | 0.367 | 8.99 | -- | -- | -1.12 | -- | -- | 0.199 | -- | 94 | 1194 | -- | -- |
| 88.36 | 0.439 | 9 | -- | -- | -- | -- | -- | 0.17 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.00 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 7 |
| 2 | 37.11 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 5 |
| 13 | 37.52 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 32 | 37.90 | humidity | 90 | 720 | < th | dose dependent | sin | 14 | NA |
| 57 | 38.40 | humidity | 80 | 1440 | > th | dose independent | rect. | 2 | 20 |
| 67 | 38.54 | humidity | 80 | 1440 | < th | dose independent | rect. | 2 | 19 |
| 74 | 38.60 | humidity | 80 | 1440 | > th | dose independent | rect. | 19 | 22 |
| 82 | 38.67 | humidity | 80 | 1440 | < th | dose independent | rect. | 19 | 22 |
| 153 | 39.07 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 181 | 39.22 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 21 |
| 185 | 39.24 | humidity | 80 | 1440 | > th | dose independent | sin | 0 | NA |
| 190 | 39.24 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 198 | 39.26 | humidity | 60 | 720 | > th | dose dependent | sin | 15 | NA |
| 235 | 39.32 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 251 | 39.34 | humidity | 60 | 1440 | > th | dose dependent | rect. | 9 | 14 |
| 258 | 39.36 | humidity | 80 | 1440 | < th | dose independent | rect. | 2 | 15 |
| 288 | 39.44 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |
| 311 | 39.51 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 316 | 39.51 | humidity | 90 | 1440 | < th | dose dependent | rect. | 10 | 21 |
| 343 | 39.57 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 357 | 39.60 | humidity | 80 | 720 | < th | dose independent | rect. | 16 | 6 |
| 363 | 39.61 | humidity | 60 | 1440 | > th | dose dependent | sin | 21 | NA |
| 365 | 39.62 | humidity | 80 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 377 | 39.64 | humidity | 80 | 720 | < th | dose independent | rect. | 18 | 3 |
| 383 | 39.65 | humidity | 80 | 720 | > th | dose independent | rect. | 12 | 21 |
| 396 | 39.66 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 21 |
| 416 | 39.69 | humidity | 80 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 420 | 39.69 | humidity | 90 | 1440 | < th | dose dependent | rect. | 10 | 13 |
| 424 | 39.70 | humidity | 80 | 1440 | > th | dose independent | rect. | 2 | 15 |
| 427 | 39.70 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 474 | 39.76 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 17 |
| 482 | 39.77 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 14 |
| 491 | 39.78 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 493 | 39.78 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 12 |
| 496 | 39.78 | humidity | 90 | 1440 | < th | dose dependent | sin | 19 | NA |
| 520 | 39.80 | humidity | 60 | 1440 | > th | dose dependent | rect. | 5 | 17 |
| 570 | 39.85 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 607 | 39.88 | humidity | 80 | 720 | > th | dose independent | sin | 17 | NA |
| 609 | 39.88 | humidity | 80 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 626 | 39.89 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 627 | 39.89 | humidity | 90 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 672 | 39.93 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 739 | 39.98 | humidity | 80 | 720 | < th | dose independent | sin | 17 | NA |
| 783 | 40.02 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 10 |
| 889 | 40.10 | humidity | 80 | 720 | < th | dose independent | rect. | 10 | 12 |