Os02g0768300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF6, transmembrane domain containing protein.
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Os02g0768300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF6, transmembrane domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1006.54 | 1.49 | 7.17 | 5.22 | 2.52 | -8.2 | 0.128 | -11.9 | -0.157 | 8.58 | 1.448 | 1452 | 5.12 | -- |
| 1105.7 | 1.55 | 7.3 | 3.58 | 2.58 | -6.39 | 0.404 | -- | -0.349 | 8.92 | 2.147 | 1447 | 5.58 | -- |
| 1006.27 | 1.48 | 7.17 | 5.21 | 2.5 | -8.12 | -- | -11.8 | -0.148 | 8.5 | 1.529 | 1453 | 5.17 | -- |
| 1100.14 | 1.54 | 7.35 | 3.52 | 2.28 | -7.23 | -- | -- | -0.548 | 7.99 | 2.16 | 1460 | 5.55 | -- |
| 1243.01 | 1.64 | 7.28 | 5.24 | -- | -8.72 | -- | -11.5 | -0.21 | -- | 1.652 | 1474 | 6.26 | -- |
| 1854.19 | 2.02 | 7.12 | 4.56 | 3.04 | -- | 0.676 | -- | 0.417 | 9.1 | -- | -- | -- | -- |
| 1855.79 | 2.02 | 7.12 | 4.59 | 3.04 | -- | -- | -- | 0.417 | 9.09 | -- | -- | -- | -- |
| 1318.28 | 1.69 | 7.42 | 3.75 | -- | -7.75 | -- | -- | -0.556 | -- | 2.38 | 1478 | 6.38 | -- |
| 1410.88 | 1.75 | 7.48 | -- | 2.25 | -7.79 | -- | -- | -1.05 | 8.25 | 2 | 1458 | 5.35 | -- |
| 2389.92 | 2.28 | 7.2 | 4.58 | -- | -- | -- | -- | 0.435 | -- | -- | -- | -- | -- |
| 2409.97 | 2.3 | 7.23 | -- | 3.05 | -- | -- | -- | -0.0932 | 8.98 | -- | -- | -- | -- |
| 1647.26 | 1.89 | 7.53 | -- | -- | -8.96 | -- | -- | -1.04 | -- | 1.993 | 1471 | 5.75 | -- |
| 2942.91 | 2.53 | 7.31 | -- | -- | -- | -- | -- | -0.0733 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 913.38 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 2 | 915.97 | temperature | 25 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 28 | 925.72 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 39 | 930.09 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 45 | 931.17 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 81 | 940.18 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 85 | 940.97 | temperature | 25 | 14400 | > th | dose dependent | sin | 20 | NA |
| 98 | 941.71 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 145 | 944.99 | temperature | 25 | 14400 | > th | dose independent | rect. | 7 | 5 |
| 150 | 945.34 | temperature | 25 | 14400 | < th | dose independent | rect. | 7 | 5 |
| 159 | 945.85 | temperature | 25 | 14400 | > th | dose independent | rect. | 5 | 10 |
| 160 | 945.94 | temperature | 25 | 14400 | > th | dose independent | rect. | 7 | 7 |
| 239 | 949.52 | temperature | 25 | 14400 | > th | dose independent | sin | 2 | NA |
| 273 | 950.58 | temperature | 25 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 293 | 951.03 | temperature | 25 | 14400 | > th | dose independent | rect. | 2 | 16 |
| 296 | 951.10 | temperature | 25 | 14400 | > th | dose independent | rect. | 2 | 18 |
| 346 | 952.31 | temperature | 25 | 14400 | > th | dose independent | rect. | 7 | 14 |
| 408 | 954.24 | temperature | 25 | 14400 | < th | dose independent | rect. | 3 | 15 |
| 421 | 954.50 | temperature | 25 | 14400 | < th | dose independent | rect. | 3 | 17 |
| 435 | 954.72 | temperature | 25 | 14400 | < th | dose independent | sin | 2 | NA |
| 456 | 955.22 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 461 | 955.27 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 533 | 956.70 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 553 | 957.49 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 11 |
| 598 | 958.78 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 655 | 960.25 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 684 | 961.06 | temperature | 25 | 14400 | > th | dose independent | rect. | 7 | 20 |
| 693 | 961.22 | temperature | 20 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 726 | 961.95 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 759 | 962.87 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 23 |
| 812 | 963.94 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 11 |
| 813 | 963.94 | temperature | 25 | 14400 | > th | dose independent | rect. | 19 | 23 |
| 833 | 964.65 | temperature | 25 | 14400 | > th | dose independent | no | NA | NA |
| 834 | 964.66 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 23 |
| 913 | 966.39 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 17 |
| 926 | 966.63 | temperature | 25 | 14400 | > th | dose independent | rect. | 13 | 23 |