Os02g0768200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : emp24/gp25L/p24 family protein.
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Os02g0768200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : emp24/gp25L/p24 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.29 | 0.236 | 10.8 | -0.292 | 0.65 | -0.25 | 0.00233 | -3.29 | 0.0842 | 24 | 11.94 | 11587 | -- | -- |
| 35.19 | 0.278 | 10.7 | 0.4 | 0.706 | 0.273 | 0.0299 | -- | 0.272 | 0.154 | 11.94 | 11587 | -- | -- |
| 25.27 | 0.234 | 10.8 | -0.312 | 0.648 | -0.249 | -- | -3.33 | 0.0815 | 24 | 10.61 | 11506 | -- | -- |
| 35.19 | 0.278 | 10.7 | 0.399 | 0.706 | 0.271 | -- | -- | 0.273 | 0.152 | 10.61 | 11506 | -- | -- |
| 51.75 | 0.335 | 10.8 | -0.166 | -- | -0.333 | -- | -3.24 | 0.104 | -- | 10.1 | 18960 | -- | -- |
| 35.9 | 0.281 | 10.7 | 0.452 | 0.642 | -- | 0.00427 | -- | 0.311 | 23.9 | -- | -- | -- | -- |
| 35.9 | 0.281 | 10.7 | 0.452 | 0.642 | -- | -- | -- | 0.311 | 23.9 | -- | -- | -- | -- |
| 58.58 | 0.356 | 10.7 | 0.318 | -- | 0.4 | -- | -- | 0.237 | -- | 12.11 | 2359 | -- | -- |
| 36.54 | 0.282 | 10.7 | -- | 0.635 | 0.35 | -- | -- | 0.156 | 23.9 | 3.169 | 47520 | -- | -- |
| 61.84 | 0.367 | 10.6 | 0.471 | -- | -- | -- | -- | 0.319 | -- | -- | -- | -- | -- |
| 41.28 | 0.301 | 10.7 | -- | 0.648 | -- | -- | -- | 0.26 | 23.9 | -- | -- | -- | -- |
| 60.83 | 0.363 | 10.7 | -- | -- | 0.534 | -- | -- | 0.18 | -- | 11.62 | 2375 | -- | -- |
| 67.7 | 0.384 | 10.7 | -- | -- | -- | -- | -- | 0.267 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.29 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 19 | 6 |
| 4 | 24.36 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 8 |
| 5 | 24.37 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 19 | 6 |
| 23 | 24.53 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 46 | 24.72 | temperature | 20.0 | 14400 | > th | dose independent | sin | 15 | NA |
| 72 | 24.81 | temperature | 20.0 | 14400 | < th | dose independent | sin | 15 | NA |
| 94 | 24.89 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 182 | 25.14 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 185 | 25.15 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 207 | 25.19 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 222 | 25.21 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 231 | 25.22 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 8 | 6 |
| 239 | 25.24 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 18 | 15 |
| 248 | 25.24 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 262 | 25.25 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 7 | 3 |
| 272 | 25.26 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 5 | 21 |
| 278 | 25.26 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 280 | 25.27 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 9 |
| 281 | 25.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 9 |
| 290 | 25.27 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 295 | 25.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 9 |
| 309 | 25.28 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 7 | 15 |
| 351 | 25.30 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 8 | 13 |
| 433 | 25.34 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 447 | 25.34 | temperature | 25.0 | 14400 | < th | dose dependent | sin | 21 | NA |
| 519 | 25.36 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 8 | 6 |
| 590 | 25.39 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 611 | 25.40 | temperature | 20.0 | 14400 | > th | dose independent | no | NA | NA |
| 691 | 25.43 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 5 | 21 |
| 719 | 25.44 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 23 | 23 |
| 733 | 25.44 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 8 | 14 |
| 796 | 25.47 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 895 | 25.50 | temperature | 10.0 | 14400 | > th | dose dependent | sin | 22 | NA |
| 958 | 25.52 | temperature | 20.0 | 14400 | < th | dose independent | no | NA | NA |
| 966 | 25.52 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |