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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0767400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Curculin-like (mannose-binding) lectin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.95 (0.0358) R2 : 0.145
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 3.27 (0.372) R2dE : 0.145 R2E : 0.145
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.035 (0.0754) R2dN8 : 0.000513 R2N8 : 8.99e-05
σ : 0.673
deviance : 208.96
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_____
C
peak time of C : --
E
wheather : wind
threshold : 1.018
memory length : 6
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 1
open length of G : 4.71

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
206.23 0.675 2.94 0.0739 0.196 2.91 0.444 -2.08 0.0428 3.78 1.118 7 0.997 4.07
206.8 0.67 2.95 0.0785 0.193 3.22 0.301 -- 0.0425 3.64 1.2 6 1.02 4
206.67 0.67 2.94 0.0717 0.199 2.95 -- -1.41 0.0437 3.17 1.122 6 1 4.02
206.93 0.67 2.95 0.0651 0.204 3.18 -- -- 0.0412 3.18 1.2 6 1.01 4.16
208.64 0.673 2.94 0.0766 -- 3.2 -- -1.14 0.0527 -- 1.092 6 0.983 4.02
234.73 0.718 2.95 -0.0112 0.414 -- -0.0637 -- 0.011 3.21 -- -- -- --
234.74 0.717 2.95 -0.00994 0.414 -- -- -- 0.0114 3.22 -- -- -- --
208.83 0.673 2.95 0.0705 -- 3.3 -- -- 0.0422 -- 1.034 6 0.999 4.52
207.03 0.67 2.95 -- 0.207 3.16 -- -- 0.0341 3.18 1.2 6 1.01 4.6
244.46 0.731 2.95 0.00765 -- -- -- -- 0.0222 -- -- -- -- --
234.74 0.717 2.95 -- 0.414 -- -- -- 0.0125 3.22 -- -- -- --
208.96 0.673 2.95 -- -- 3.27 -- -- 0.035 -- 1.018 6 1 4.71
244.46 0.73 2.95 -- -- -- -- -- 0.0214 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 207.37 wind 1 10 > th dose dependent rect. 1 4
7 211.61 wind 7 720 > th dose independent rect. 24 1
9 211.61 wind 5 720 > th dose dependent rect. 1 1
26 212.67 wind 5 10 > th dose dependent rect. 24 9
29 212.82 wind 7 90 > th dose independent rect. 24 8
32 212.96 wind 3 30 > th dose independent rect. 1 3
52 213.79 wind 5 10 > th dose independent rect. 24 8
90 214.40 wind 7 90 > th dose independent rect. 24 4
131 215.05 wind 7 10 > th dose independent rect. 20 8
253 215.94 wind 7 10 > th dose dependent rect. 20 8
300 216.55 wind 7 720 > th dose independent rect. 19 9
314 216.68 wind 7 720 > th dose independent rect. 19 13
357 216.95 wind 5 720 < th dose independent rect. 20 7
466 218.20 humidity 60 90 < th dose dependent rect. 9 1
497 218.35 wind 7 1440 < th dose independent rect. 23 2
504 218.43 wind 9 1440 < th dose independent rect. 21 8
520 218.61 humidity 60 90 < th dose independent rect. 9 1
548 218.75 wind 7 1440 < th dose independent rect. 21 5
574 218.81 wind 9 720 > th dose independent rect. 19 3
575 218.82 wind 5 720 < th dose independent rect. 20 12
576 218.84 wind 9 720 > th dose dependent rect. 19 2
669 219.15 wind 5 720 < th dose independent rect. 23 9