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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0767200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Lipase, class 3 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.01 (0.0193) R2 : 0.00269
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.045 (0.0406) R2dN8 : 0.00347 R2N8 : 0.00269
σ : 0.363
deviance : 60.6
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
49.68 0.331 3.06 -0.721 0.17 0.291 -0.244 -2.16 -0.156 6.74 10.94 4294 -- --
52.92 0.339 3.03 -0.471 0.169 0.274 -0.28 -- -0.07 6.62 11.07 4448 -- --
49.82 0.329 3.06 -0.711 0.168 0.283 -- -2.11 -0.152 6.97 10.95 4293 -- --
53.05 0.339 3.03 -0.479 0.169 0.277 -- -- -0.0718 6.66 11.07 4448 -- --
51.3 0.334 3.06 -0.706 -- 0.294 -- -2.11 -0.147 -- 11.07 4316 -- --
54.03 0.345 3.02 -0.438 0.164 -- -0.242 -- -0.00759 6.51 -- -- -- --
54.15 0.345 3.02 -0.441 0.163 -- -- -- -0.00649 6.98 -- -- -- --
54.45 0.344 3.03 -0.477 -- 0.266 -- -- -0.0656 -- 11.06 4436 -- --
57.03 0.352 3.02 -- 0.175 0.193 -- -- 0.00382 6.53 9.975 4413 -- --
55.56 0.348 3.02 -0.437 -- -- -- -- -0.00347 -- -- -- -- --
59.27 0.36 3.01 -- 0.159 -- -- -- 0.0426 7.16 -- -- -- --
57.09 0.352 3.02 -- -- 0.446 -- -- 0.00283 -- 9.97 4447 -- --
60.6 0.363 3.01 -- -- -- -- -- 0.045 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 47.79 humidity 90 30 < th dose dependent rect. 19 14
2 47.84 humidity 90 30 < th dose dependent rect. 16 17
7 48.30 humidity 80 1440 > th dose independent rect. 22 9
8 48.36 humidity 80 1440 > th dose independent rect. 23 4
9 48.37 humidity 80 1440 > th dose independent rect. 23 7
12 48.52 radiation 30 4320 < th dose dependent rect. 12 1
14 48.59 atmosphere 1005 30 > th dose independent rect. 7 2
16 48.66 atmosphere 1005 90 < th dose independent rect. 18 4
22 48.78 humidity 80 1440 < th dose independent rect. 22 9
29 48.86 wind 9 1440 > th dose independent rect. 18 2
33 48.94 humidity 90 30 < th dose dependent rect. 24 9
35 48.96 radiation 20 4320 < th dose independent rect. 12 1
41 49.04 radiation 20 4320 > th dose independent rect. 12 1
43 49.10 atmosphere 1005 90 > th dose dependent rect. 7 1
48 49.13 radiation 1 270 > th dose independent rect. 4 1
59 49.13 radiation 1 270 > th dose dependent rect. 4 1
82 49.24 humidity 80 1440 < th dose independent rect. 23 4
87 49.25 humidity 80 1440 < th dose dependent rect. 23 4
93 49.28 humidity 80 4320 > th dose dependent rect. 9 1
99 49.33 radiation 10 4320 < th dose dependent rect. 9 4
100 49.34 humidity 80 720 < th dose dependent rect. 20 11
102 49.35 humidity 90 270 < th dose independent rect. 1 7
105 49.37 humidity 80 720 < th dose dependent rect. 21 9
107 49.38 humidity 80 720 < th dose dependent rect. 21 6
115 49.41 radiation 10 4320 < th dose dependent rect. 8 7
130 49.49 humidity 90 30 < th dose dependent sin 10 NA
135 49.51 humidity 90 1440 < th dose dependent rect. 23 1
141 49.54 radiation 10 4320 > th dose independent rect. 17 22
143 49.54 humidity 80 720 < th dose dependent rect. 21 3
145 49.55 radiation 10 4320 > th dose independent rect. 6 10
164 49.56 radiation 10 4320 > th dose independent rect. 12 22
173 49.58 wind 9 1440 > th dose dependent rect. 18 1
175 49.59 radiation 1 270 > th dose dependent rect. 17 13
209 49.66 radiation 10 4320 > th dose independent sin 3 NA
215 49.67 humidity 90 30 < th dose dependent rect. 16 19
221 49.69 humidity 90 30 < th dose dependent rect. 4 5
237 49.74 humidity 70 10 > th dose dependent rect. 22 13
246 49.77 temperature 20 270 > th dose independent rect. 7 1
281 49.79 radiation 10 4320 > th dose independent no NA NA
368 49.80 humidity 80 4320 > th dose dependent rect. 2 13
372 49.81 radiation 10 4320 > th dose independent rect. 14 23
388 49.85 humidity 80 1440 > th dose independent sin 10 NA
410 49.87 humidity 80 4320 > th dose dependent rect. 5 10
465 49.91 radiation 20 270 > th dose dependent rect. 16 15
476 49.92 humidity 80 4320 > th dose dependent rect. 5 6
478 49.93 radiation 10 90 < th dose independent sin 11 NA
480 49.93 humidity 80 4320 > th dose dependent rect. 2 9
488 49.94 atmosphere 1005 270 > th dose independent rect. 4 4
492 49.95 humidity 80 720 < th dose independent rect. 21 1
520 49.97 humidity 50 1440 > th dose dependent rect. 23 1
523 49.97 radiation 20 4320 < th dose dependent rect. 14 1
529 49.97 radiation 20 4320 < th dose dependent rect. 8 14
530 49.97 radiation 20 4320 < th dose dependent rect. 8 17
537 49.98 radiation 20 4320 < th dose dependent sin 23 NA
546 49.99 humidity 90 30 < th dose dependent rect. 7 2
569 50.01 radiation 10 90 < th dose independent rect. 21 10
573 50.01 atmosphere 995 270 > th dose dependent rect. 24 9
577 50.02 humidity 90 30 < th dose independent rect. 7 2
578 50.02 humidity 80 4320 > th dose dependent sin 5 NA
579 50.02 radiation 1 4320 > th dose dependent rect. 12 2
604 50.04 radiation 1 4320 > th dose dependent rect. 12 4
624 50.05 temperature 15 14400 < th dose dependent rect. 8 4
699 50.11 atmosphere 1010 270 < th dose dependent rect. 16 4
734 50.13 humidity 50 720 > th dose dependent rect. 20 9
735 50.13 humidity 50 720 > th dose dependent rect. 22 9
739 50.14 humidity 80 4320 > th dose independent rect. 6 8
743 50.14 temperature 15 14400 < th dose dependent rect. 9 2
752 50.15 humidity 80 720 < th dose independent rect. 20 4
764 50.16 humidity 70 720 > th dose dependent rect. 20 11
810 50.19 humidity 90 4320 < th dose independent rect. 8 2
828 50.19 radiation 20 4320 < th dose dependent rect. 12 23
831 50.20 radiation 40 4320 > th dose dependent rect. 15 1
917 50.22 radiation 20 4320 < th dose dependent no NA NA
959 50.23 temperature 15 14400 < th dose dependent rect. 11 1
995 50.25 radiation 1 30 > th dose dependent rect. 16 17