Os02g0764400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Galactoside 2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan alpha-(1,2)-fucosyltransferase) (PsFT1).
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Os02g0764400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Galactoside 2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan alpha-(1,2)-fucosyltransferase) (PsFT1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 117.41 | 0.509 | 2.87 | -0.0919 | 0.175 | -0.136 | -0.709 | 0.692 | 0.0891 | 8.59 | 5 | 2 | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 120.58 | 0.515 | 2.86 | -0.139 | 0.219 | -- | -0.729 | -- | 0.0505 | 6.88 | -- | -- | -- | -- |
| 121.94 | 0.517 | 2.86 | -0.152 | 0.217 | -- | -- | -- | 0.0526 | 7.11 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 124.42 | 0.521 | 2.87 | -0.148 | -- | -- | -- | -- | 0.0565 | -- | -- | -- | -- | -- |
| 122.54 | 0.518 | 2.86 | -- | 0.215 | -- | -- | -- | 0.0695 | 7.16 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 125 | 0.522 | 2.86 | -- | -- | -- | -- | -- | 0.0729 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 108.16 | wind | 1.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 2 | 110.01 | wind | 1.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 3 | 112.43 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 8 | 1 |
| 16 | 113.61 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 6 | 5 |
| 23 | 113.99 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 25 | 114.03 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 27 | 114.04 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 30 | 114.05 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 31 | 114.05 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 32 | 114.05 | humidity | 90.0 | 90 | > th | dose independent | rect. | 6 | 5 |
| 36 | 114.06 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 41 | 114.08 | wind | 9.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 42 | 114.08 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 45 | 114.08 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 49 | 114.08 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 51 | 114.08 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 56 | 114.08 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 57 | 114.08 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 58 | 114.08 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 61 | 114.08 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 66 | 114.08 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 70 | 114.10 | humidity | 90.0 | 10 | > th | dose independent | rect. | 7 | 5 |
| 75 | 114.20 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 76 | 114.28 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 77 | 114.29 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 85 | 114.43 | humidity | 90.0 | 10 | > th | dose independent | rect. | 2 | 10 |
| 92 | 114.48 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 6 | 13 |
| 94 | 114.55 | humidity | 90.0 | 10 | > th | dose independent | rect. | 7 | 3 |
| 100 | 114.57 | humidity | 90.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 104 | 114.58 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 7 | 1 |
| 121 | 114.62 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 193 | 115.02 | humidity | 90.0 | 10 | > th | dose independent | sin | 2 | NA |
| 211 | 115.03 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 234 | 115.19 | wind | 7.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 238 | 115.19 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 250 | 115.27 | humidity | 90.0 | 30 | < th | dose independent | sin | 3 | NA |
| 251 | 115.27 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 2 | 3 |
| 298 | 115.61 | wind | 1.0 | 30 | < th | dose independent | rect. | 7 | 1 |
| 300 | 115.62 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 8 |
| 302 | 115.64 | humidity | 90.0 | 10 | > th | dose independent | rect. | 2 | 8 |
| 312 | 115.69 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 341 | 115.72 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 395 | 115.84 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 3 |
| 406 | 115.87 | humidity | 90.0 | 10 | < th | dose independent | rect. | 5 | 10 |
| 441 | 116.08 | humidity | 90.0 | 10 | > th | dose independent | rect. | 24 | 12 |
| 443 | 116.08 | humidity | 90.0 | 30 | < th | dose independent | rect. | 2 | 13 |
| 451 | 116.11 | humidity | 90.0 | 30 | < th | dose independent | rect. | 24 | 15 |
| 458 | 116.15 | wind | 1.0 | 90 | < th | dose independent | rect. | 7 | 21 |
| 466 | 116.17 | humidity | 90.0 | 10 | > th | dose independent | rect. | 24 | 18 |
| 507 | 116.27 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 2 | 10 |
| 547 | 116.40 | humidity | 90.0 | 10 | > th | dose independent | rect. | 7 | 21 |
| 553 | 116.42 | wind | 3.0 | 30 | < th | dose dependent | rect. | 7 | 1 |
| 554 | 116.42 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 2 | 3 |
| 608 | 116.57 | humidity | 90.0 | 30 | < th | dose independent | rect. | 22 | 17 |
| 618 | 116.60 | wind | 1.0 | 90 | < th | dose independent | rect. | 9 | 19 |
| 655 | 116.69 | wind | 1.0 | 90 | < th | dose independent | rect. | 2 | 9 |
| 660 | 116.69 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 2 | 3 |
| 673 | 116.70 | wind | 1.0 | 90 | < th | dose dependent | rect. | 9 | 19 |
| 721 | 116.81 | wind | 1.0 | 90 | < th | dose dependent | rect. | 7 | 21 |
| 738 | 116.83 | wind | 1.0 | 90 | < th | dose dependent | rect. | 14 | 14 |
| 751 | 116.87 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 5 | 21 |
| 777 | 116.92 | wind | 3.0 | 10 | < th | dose dependent | rect. | 2 | 3 |
| 782 | 116.93 | humidity | 90.0 | 10 | < th | dose independent | rect. | 5 | 14 |
| 792 | 116.95 | humidity | 90.0 | 30 | < th | dose independent | rect. | 16 | 23 |
| 793 | 116.95 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 23 |
| 801 | 116.96 | wind | 1.0 | 10 | > th | dose independent | rect. | 8 | 23 |
| 809 | 116.98 | wind | 1.0 | 90 | < th | dose independent | rect. | 14 | 14 |
| 811 | 116.99 | humidity | 90.0 | 30 | < th | dose independent | rect. | 22 | 21 |
| 835 | 117.03 | wind | 1.0 | 90 | < th | dose independent | rect. | 2 | 6 |
| 839 | 117.03 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 2 | 7 |
| 841 | 117.03 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 5 | 21 |
| 864 | 117.06 | radiation | 10.0 | 30 | < th | dose independent | rect. | 5 | 21 |
| 896 | 117.11 | humidity | 90.0 | 10 | < th | dose independent | rect. | 5 | 23 |
| 899 | 117.12 | wind | 9.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 911 | 117.12 | humidity | 90.0 | 30 | < th | dose independent | rect. | 24 | 19 |
| 912 | 117.12 | wind | 9.0 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 936 | 117.15 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 999 | 117.19 | temperature | 20.0 | 10 | > th | dose independent | rect. | 2 | 6 |