Os02g0762400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-dependent kinase inhibitor family protein.
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Os02g0762400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-dependent kinase inhibitor family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.06 | 0.27 | 11.1 | 0.0326 | 0.6 | -0.37 | 0.353 | 1.88 | -0.163 | 22.2 | 24.9 | 19 | -- | -- |
| 37.8 | 0.286 | 11.1 | 0.324 | 0.595 | -0.66 | 0.851 | -- | -0.0732 | 22.4 | 21.8 | 26 | -- | -- |
| 33.46 | 0.271 | 11.1 | -0.0148 | 0.598 | -0.344 | -- | 2.1 | -0.17 | 22.1 | 24.99 | 18 | -- | -- |
| 39.77 | 0.294 | 11.1 | 0.282 | 0.564 | -0.96 | -- | -- | -0.0394 | 21.8 | 19.41 | 240 | -- | -- |
| 53.38 | 0.34 | 11.1 | 0.0649 | -- | -0.00763 | -- | 2.34 | -0.103 | -- | 23.98 | 19 | -- | -- |
| 42.5 | 0.306 | 11.1 | 0.441 | 0.548 | -- | 0.866 | -- | -0.00805 | 22.2 | -- | -- | -- | -- |
| 45.3 | 0.315 | 11.1 | 0.409 | 0.552 | -- | -- | -- | -0.00853 | 21.8 | -- | -- | -- | -- |
| 51.52 | 0.334 | 11.1 | 0.169 | -- | -0.886 | -- | -- | -0.119 | -- | 34.4 | 735 | -- | -- |
| 38.37 | 0.288 | 11.1 | -- | 0.547 | -0.985 | -- | -- | -0.0885 | 21.5 | 18.48 | 3264 | -- | -- |
| 63.45 | 0.372 | 11.1 | 0.415 | -- | -- | -- | -- | -0.009 | -- | -- | -- | -- | -- |
| 49.72 | 0.33 | 11.1 | -- | 0.553 | -- | -- | -- | -0.0541 | 21.8 | -- | -- | -- | -- |
| 52.31 | 0.337 | 11.1 | -- | -- | -0.934 | -- | -- | -0.172 | -- | 34.9 | 744 | -- | -- |
| 67.98 | 0.385 | 11.1 | -- | -- | -- | -- | -- | -0.055 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.67 | temperature | 10 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 3 | 32.43 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 19 |
| 4 | 32.43 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 19 |
| 13 | 32.59 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 16 |
| 43 | 32.75 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 21 |
| 63 | 32.85 | temperature | 15 | 720 | > th | dose dependent | sin | 20 | NA |
| 76 | 32.92 | temperature | 25 | 10 | < th | dose dependent | rect. | 18 | 22 |
| 88 | 32.96 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 123 | 33.06 | temperature | 25 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 125 | 33.06 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 127 | 33.07 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 132 | 33.08 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 134 | 33.08 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 140 | 33.09 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 141 | 33.09 | temperature | 25 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 150 | 33.10 | temperature | 25 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 153 | 33.11 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 157 | 33.12 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 167 | 33.17 | temperature | 30 | 720 | < th | dose dependent | sin | 18 | NA |
| 168 | 33.18 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 16 |
| 175 | 33.20 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 23 |
| 263 | 33.41 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 312 | 33.51 | temperature | 10 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 356 | 33.58 | temperature | 15 | 1440 | > th | dose independent | rect. | 3 | 6 |
| 386 | 33.64 | humidity | 50 | 14400 | > th | dose independent | rect. | 2 | 7 |
| 402 | 33.66 | humidity | 80 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 431 | 33.72 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 481 | 33.77 | temperature | 15 | 720 | > th | dose dependent | rect. | 11 | 10 |
| 614 | 33.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 628 | 33.98 | temperature | 15 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 639 | 33.99 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 19 |
| 682 | 34.05 | temperature | 20 | 720 | > th | dose independent | sin | 22 | NA |
| 703 | 34.07 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 770 | 34.15 | wind | 7 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 799 | 34.18 | humidity | 80 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 825 | 34.21 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 858 | 34.24 | temperature | 10 | 30 | > th | dose dependent | no | NA | NA |
| 887 | 34.26 | humidity | 50 | 43200 | < th | dose dependent | rect. | 4 | 7 |
| 894 | 34.27 | temperature | 15 | 270 | > th | dose dependent | sin | 16 | NA |
| 895 | 34.27 | wind | 1 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 929 | 34.29 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 7 |
| 944 | 34.30 | humidity | 80 | 43200 | < th | dose dependent | rect. | 7 | 1 |