Os02g0761300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1645 family protein.
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Os02g0761300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1645 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 843.84 | 1.36 | 4 | 1.16 | 13.3 | 15.2 | 13.1 | 14.5 | 0.495 | 16.7 | 0.81 | 719 | 8.99 | -- |
| 875.79 | 1.38 | 3.94 | 0.81 | 14.1 | 16.2 | 0.946 | -- | 0.508 | 16.6 | 1.805 | 708 | 8.87 | -- |
| 883.14 | 1.38 | 3.86 | 1.09 | 9.47 | 12 | -- | 0.563 | 0.69 | 15.7 | 1.82 | 725 | 11.3 | -- |
| 868.72 | 1.37 | 3.94 | 1.06 | 13.9 | 16.1 | -- | -- | 0.628 | 16.6 | 1.802 | 714 | 8.88 | -- |
| 1025.3 | 1.5 | 3.83 | 0.856 | -- | 0.818 | -- | 1.3 | 0.287 | -- | 0.9862 | 1503 | 11.9 | -- |
| 1037.42 | 1.51 | 3.85 | 0.87 | 0.733 | -- | 0.142 | -- | 0.281 | 21.3 | -- | -- | -- | -- |
| 1037.5 | 1.51 | 3.85 | 0.865 | 0.733 | -- | -- | -- | 0.281 | 21.3 | -- | -- | -- | -- |
| 924.06 | 1.42 | 3.83 | 0.547 | -- | 1.99 | -- | -- | 0.256 | -- | 2.119 | 1473 | 12 | -- |
| 897.18 | 1.4 | 3.94 | -- | 13.5 | 15.6 | -- | -- | 0.475 | 16.7 | 1.827 | 717 | 8.79 | -- |
| 1068.74 | 1.53 | 3.83 | 0.868 | -- | -- | -- | -- | 0.278 | -- | -- | -- | -- | -- |
| 1057.22 | 1.52 | 3.87 | -- | 0.733 | -- | -- | -- | 0.184 | 21.4 | -- | -- | -- | -- |
| 916.62 | 1.41 | 3.76 | -- | -- | 3.08 | -- | -- | 0.571 | -- | 2.289 | 1490 | 11.5 | -- |
| 1088.63 | 1.54 | 3.85 | -- | -- | -- | -- | -- | 0.181 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 850.49 | radiation | 1 | 720 | < th | dose independent | sin | 15 | NA |
| 5 | 856.41 | radiation | 1 | 720 | < th | dose dependent | sin | 21 | NA |
| 8 | 857.25 | radiation | 1 | 720 | < th | dose independent | sin | 20 | NA |
| 11 | 857.78 | radiation | 1 | 720 | > th | dose independent | sin | 15 | NA |
| 14 | 859.68 | radiation | 1 | 720 | < th | dose dependent | sin | 15 | NA |
| 22 | 862.57 | radiation | 1 | 720 | < th | dose independent | rect. | 14 | 16 |
| 26 | 863.84 | radiation | 1 | 720 | < th | dose independent | rect. | 8 | 22 |
| 36 | 867.53 | radiation | 1 | 720 | < th | dose independent | rect. | 8 | 13 |
| 38 | 868.00 | radiation | 1 | 720 | < th | dose independent | rect. | 14 | 7 |
| 42 | 868.56 | radiation | 1 | 720 | < th | dose independent | rect. | 8 | 15 |
| 44 | 868.83 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 10 |
| 53 | 869.52 | radiation | 1 | 720 | > th | dose independent | rect. | 15 | 15 |
| 69 | 871.75 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 10 |
| 72 | 872.16 | radiation | 1 | 720 | > th | dose independent | rect. | 13 | 6 |
| 82 | 872.17 | radiation | 1 | 720 | > th | dose independent | rect. | 7 | 23 |
| 86 | 872.97 | radiation | 10 | 720 | < th | dose dependent | rect. | 16 | 7 |
| 87 | 873.00 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 6 |
| 89 | 873.21 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 10 |
| 93 | 873.57 | radiation | 1 | 720 | < th | dose dependent | rect. | 12 | 18 |
| 95 | 873.84 | radiation | 1 | 720 | < th | dose dependent | rect. | 8 | 22 |
| 114 | 875.13 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 19 |
| 119 | 875.29 | radiation | 1 | 720 | < th | dose independent | rect. | 14 | 13 |
| 177 | 877.12 | radiation | 1 | 720 | < th | dose dependent | rect. | 8 | 13 |
| 192 | 878.06 | radiation | 1 | 720 | < th | dose dependent | rect. | 12 | 9 |
| 205 | 878.31 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 15 |
| 216 | 878.58 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 231 | 879.32 | radiation | 1 | 720 | < th | dose independent | rect. | 5 | 16 |
| 236 | 879.74 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 16 |
| 250 | 879.89 | radiation | 1 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 268 | 880.39 | radiation | 1 | 720 | < th | dose dependent | rect. | 14 | 13 |
| 367 | 882.47 | radiation | 1 | 720 | < th | dose independent | rect. | 3 | 23 |
| 391 | 882.91 | radiation | 1 | 720 | < th | dose independent | rect. | 14 | 23 |
| 404 | 883.14 | radiation | 1 | 720 | < th | dose independent | rect. | 5 | 23 |
| 437 | 883.51 | radiation | 1 | 720 | < th | dose independent | no | NA | NA |
| 471 | 884.00 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 506 | 884.50 | radiation | 1 | 720 | < th | dose dependent | no | NA | NA |
| 509 | 884.53 | radiation | 1 | 720 | < th | dose dependent | rect. | 14 | 23 |
| 621 | 888.08 | radiation | 1 | 720 | > th | dose independent | no | NA | NA |
| 622 | 888.08 | radiation | 1 | 720 | > th | dose independent | rect. | 4 | 15 |
| 761 | 889.80 | radiation | 1 | 720 | < th | dose independent | rect. | 22 | 23 |
| 777 | 890.06 | radiation | 1 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 780 | 890.16 | radiation | 1 | 720 | < th | dose independent | rect. | 24 | 23 |
| 783 | 890.25 | radiation | 1 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 799 | 890.74 | radiation | 1 | 720 | > th | dose independent | rect. | 15 | 23 |
| 844 | 892.76 | radiation | 1 | 720 | > th | dose independent | rect. | 12 | 23 |
| 850 | 893.36 | radiation | 1 | 720 | > th | dose independent | rect. | 10 | 23 |
| 852 | 893.40 | radiation | 10 | 1440 | < th | dose dependent | rect. | 10 | 2 |
| 881 | 894.61 | radiation | 1 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 990 | 896.99 | wind | 7 | 720 | < th | dose independent | rect. | 13 | 22 |