Os02g0760700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os02g0760700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 84.09 | 0.431 | 7.99 | 0.421 | 0.668 | 2.28 | -1.59 | -2.03 | -0.334 | 19.4 | 19.54 | 40 | -- | -- |
| 86.85 | 0.434 | 7.95 | 0.734 | 0.679 | 2.33 | -1.71 | -- | -0.242 | 19 | 17.35 | 41 | -- | -- |
| 90.78 | 0.444 | 8 | 0.443 | 0.642 | 2.27 | -- | -2.09 | -0.348 | 19.6 | 19.74 | 51 | -- | -- |
| 94.19 | 0.452 | 7.95 | 0.768 | 0.656 | 2.28 | -- | -- | -0.242 | 19.5 | 18 | 51 | -- | -- |
| 101.63 | 0.47 | 8 | 0.241 | -- | 2.52 | -- | -2.43 | -0.409 | -- | 18.97 | 227 | -- | -- |
| 160.28 | 0.594 | 7.87 | 1.28 | 1.18 | -- | -1.23 | -- | 0.138 | 17 | -- | -- | -- | -- |
| 164.06 | 0.6 | 7.87 | 1.28 | 1.17 | -- | -- | -- | 0.132 | 16.9 | -- | -- | -- | -- |
| 106.99 | 0.482 | 7.94 | 0.655 | -- | 2.68 | -- | -- | -0.29 | -- | 16.61 | 208 | -- | -- |
| 107.32 | 0.482 | 7.98 | -- | 0.621 | 3.04 | -- | -- | -0.367 | 20 | 13.45 | 56 | -- | -- |
| 236.51 | 0.719 | 7.86 | 1.23 | -- | -- | -- | -- | 0.102 | -- | -- | -- | -- | -- |
| 206.92 | 0.673 | 7.9 | -- | 1.15 | -- | -- | -- | -0.00982 | 16.9 | -- | -- | -- | -- |
| 117.34 | 0.505 | 7.97 | -- | -- | 3.04 | -- | -- | -0.386 | -- | 15.37 | 219 | -- | -- |
| 276.54 | 0.776 | 7.89 | -- | -- | -- | -- | -- | -0.0347 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.05 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 2 | 84.01 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 4 | 84.35 | temperature | 20 | 30 | > th | dose dependent | no | NA | NA |
| 5 | 84.59 | temperature | 10 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 9 | 84.95 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 11 | 85.15 | temperature | 20 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 15 | 85.67 | temperature | 20 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 22 | 86.19 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 30 | 87.24 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 33 | 87.40 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 34 | 87.42 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 36 | 87.61 | temperature | 20 | 30 | > th | dose dependent | rect. | 2 | 23 |
| 38 | 87.63 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 42 | 87.88 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 46 | 88.00 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 51 | 88.05 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 52 | 88.12 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 57 | 88.24 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 58 | 88.30 | temperature | 25 | 1440 | > th | dose independent | rect. | 7 | 18 |
| 66 | 88.54 | temperature | 25 | 1440 | < th | dose independent | rect. | 7 | 18 |
| 67 | 88.56 | temperature | 25 | 1440 | < th | dose independent | rect. | 7 | 6 |
| 73 | 88.66 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 78 | 88.68 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 82 | 88.76 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 89 | 88.90 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 92 | 88.94 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 99 | 89.13 | temperature | 20 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 105 | 89.27 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 13 |
| 106 | 89.28 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 11 |
| 115 | 89.39 | temperature | 20 | 1440 | > th | dose dependent | sin | 3 | NA |
| 133 | 89.57 | temperature | 20 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 152 | 89.68 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 155 | 89.70 | temperature | 25 | 1440 | > th | dose independent | rect. | 7 | 6 |
| 193 | 89.89 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 14 |
| 196 | 89.92 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 199 | 89.93 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 218 | 90.04 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 239 | 90.15 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 258 | 90.21 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 275 | 90.26 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 20 |
| 291 | 90.29 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 21 |
| 298 | 90.30 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 21 |
| 347 | 90.41 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 381 | 90.50 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 5 |
| 386 | 90.53 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 391 | 90.55 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 424 | 90.64 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 461 | 90.76 | temperature | 25 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 498 | 90.83 | temperature | 20 | 4320 | > th | dose dependent | sin | 9 | NA |
| 520 | 90.86 | temperature | 20 | 14400 | > th | dose dependent | rect. | 19 | 10 |
| 531 | 90.88 | temperature | 10 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 563 | 90.94 | temperature | 25 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 602 | 91.00 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 618 | 91.03 | temperature | 25 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 629 | 91.04 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 15 |
| 631 | 91.05 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 681 | 91.11 | temperature | 10 | 14400 | > th | dose dependent | rect. | 1 | 4 |
| 683 | 91.11 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 14 |
| 712 | 91.15 | temperature | 10 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 727 | 91.16 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 768 | 91.21 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 8 |
| 819 | 91.26 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 18 |
| 904 | 91.35 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 938 | 91.38 | temperature | 25 | 4320 | < th | dose independent | sin | 2 | NA |
| 971 | 91.41 | temperature | 10 | 4320 | > th | dose dependent | sin | 8 | NA |
| 972 | 91.41 | temperature | 30 | 4320 | < th | dose dependent | sin | 8 | NA |
| 973 | 91.41 | temperature | 20 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 995 | 91.43 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 4 |