Os02g0760600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : BTB domain containing protein.
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Os02g0760600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : BTB domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 102.03 | 0.475 | 8.33 | -0.391 | 0.462 | -2.85 | -1.33 | -0.9 | -0.486 | 19.8 | 27.94 | 51 | -- | -- |
| 103.41 | 0.474 | 8.33 | -0.488 | 0.427 | -2.88 | -1.4 | -- | -0.431 | 20 | 30.54 | 48 | -- | -- |
| 105.81 | 0.479 | 8.35 | -0.441 | 0.45 | -2.91 | -- | -0.935 | -0.512 | 21 | 28.27 | 57 | -- | -- |
| 106.82 | 0.481 | 8.36 | -0.535 | 0.494 | -2.99 | -- | -- | -0.542 | 21.7 | 28.86 | 41 | -- | -- |
| 112.71 | 0.494 | 8.33 | -0.394 | -- | -3.01 | -- | -1.05 | -0.522 | -- | 27.77 | 155 | -- | -- |
| 230.34 | 0.712 | 8.21 | 0.191 | 0.947 | -- | -0.868 | -- | 0.0856 | 16.7 | -- | -- | -- | -- |
| 232.17 | 0.714 | 8.22 | 0.187 | 0.939 | -- | -- | -- | 0.0813 | 16.5 | -- | -- | -- | -- |
| 114.36 | 0.498 | 8.34 | -0.551 | -- | -2.96 | -- | -- | -0.55 | -- | 28.08 | 188 | -- | -- |
| 113.98 | 0.497 | 8.32 | -- | 0.464 | -2.86 | -- | -- | -0.398 | 21.4 | 30.38 | 41 | -- | -- |
| 279.37 | 0.781 | 8.21 | 0.15 | -- | -- | -- | -- | 0.0565 | -- | -- | -- | -- | -- |
| 233.09 | 0.714 | 8.22 | -- | 0.935 | -- | -- | -- | 0.0605 | 16.5 | -- | -- | -- | -- |
| 122.34 | 0.515 | 8.3 | -- | -- | -2.84 | -- | -- | -0.366 | -- | 31.06 | 137 | -- | -- |
| 279.97 | 0.781 | 8.21 | -- | -- | -- | -- | -- | 0.0398 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 97.55 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 2 | 100.41 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 4 | 102.13 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 5 | 102.47 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 6 | 102.65 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 7 | 102.77 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 10 | 103.38 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 15 | 103.89 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 17 | 104.24 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 24 | 105.19 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 25 | 105.21 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 26 | 105.21 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 36 | 106.80 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 42 | 107.75 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 49 | 108.23 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 55 | 109.16 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 56 | 109.17 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 73 | 110.97 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 82 | 111.94 | temperature | 20 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 97 | 113.40 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 98 | 113.48 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 119 | 114.38 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 129 | 114.86 | temperature | 20 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 139 | 115.34 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 140 | 115.40 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 19 |
| 162 | 116.39 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 196 | 117.99 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 20 |
| 228 | 118.99 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 232 | 119.02 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 296 | 120.49 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 10 |
| 323 | 120.91 | temperature | 20 | 1440 | > th | dose dependent | sin | 13 | NA |
| 378 | 121.52 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 418 | 121.89 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 19 |
| 521 | 122.67 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 21 |
| 524 | 122.69 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 541 | 122.77 | temperature | 30 | 1440 | < th | dose dependent | sin | 15 | NA |
| 562 | 122.84 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 664 | 123.29 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 19 |
| 666 | 123.29 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 21 |
| 792 | 123.71 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 811 | 123.74 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 895 | 123.95 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 975 | 124.10 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 23 |