Os02g0757800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0757800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 200.05 | 0.665 | 3.01 | 0.0451 | 0.071 | 1.01 | -1.03 | 2.01 | 0.241 | 11.1 | 48.93 | 16 | -- | -- |
| 203.88 | 0.665 | 3 | 0.0836 | 0.0696 | 1.01 | -0.718 | -- | 0.257 | 10.6 | 49.45 | 15 | -- | -- |
| 203.99 | 0.665 | 3.01 | 0.0261 | 0.0742 | 1.05 | -- | 1.5 | 0.238 | 10.6 | 49.14 | 21 | -- | -- |
| 205.96 | 0.668 | 3 | 0.0625 | 0.0708 | 0.999 | -- | -- | 0.254 | 10.4 | 49.01 | 16 | -- | -- |
| 204.29 | 0.666 | 3.01 | 0.0332 | -- | 1.11 | -- | 1.48 | 0.241 | -- | 48.92 | 21 | -- | -- |
| 212.02 | 0.683 | 3.01 | 0.057 | 0.179 | -- | -0.744 | -- | 0.224 | 11.2 | -- | -- | -- | -- |
| 214.38 | 0.686 | 3.01 | 0.0272 | 0.183 | -- | -- | -- | 0.222 | 11.5 | -- | -- | -- | -- |
| 206.23 | 0.669 | 3.01 | 0.0596 | -- | 1.04 | -- | -- | 0.252 | -- | 48.73 | 16 | -- | -- |
| 206.05 | 0.669 | 3.01 | -- | 0.0704 | 0.99 | -- | -- | 0.245 | 10.5 | 48.96 | 16 | -- | -- |
| 216.48 | 0.688 | 3.01 | 0.0222 | -- | -- | -- | -- | 0.22 | -- | -- | -- | -- | -- |
| 214.4 | 0.685 | 3.01 | -- | 0.183 | -- | -- | -- | 0.219 | 11.5 | -- | -- | -- | -- |
| 206.33 | 0.669 | 3.01 | -- | -- | 1.03 | -- | -- | 0.245 | -- | 48.7 | 16 | -- | -- |
| 216.49 | 0.687 | 3.01 | -- | -- | -- | -- | -- | 0.217 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 195.69 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 9 | 1 |
| 3 | 195.69 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 15 | 196.30 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 10 | 2 |
| 16 | 196.39 | humidity | 90.0 | 270 | > th | dose independent | rect. | 10 | 2 |
| 29 | 197.46 | wind | 1.0 | 30 | < th | dose dependent | rect. | 10 | 3 |
| 41 | 197.94 | wind | 1.0 | 90 | < th | dose independent | rect. | 10 | 2 |
| 50 | 198.18 | wind | 5.0 | 90 | < th | dose independent | rect. | 21 | 22 |
| 53 | 198.36 | wind | 7.0 | 90 | < th | dose dependent | rect. | 9 | 10 |
| 59 | 198.67 | wind | 9.0 | 90 | < th | dose dependent | rect. | 7 | 12 |
| 85 | 199.49 | wind | 9.0 | 90 | < th | dose dependent | rect. | 21 | 22 |
| 86 | 199.58 | wind | 5.0 | 90 | < th | dose independent | rect. | 7 | 12 |
| 92 | 199.84 | wind | 5.0 | 90 | < th | dose independent | rect. | 9 | 10 |
| 117 | 200.63 | wind | 1.0 | 90 | > th | dose dependent | rect. | 10 | 11 |
| 121 | 200.68 | wind | 3.0 | 90 | > th | dose independent | rect. | 10 | 11 |
| 135 | 200.87 | radiation | 40.0 | 10 | > th | dose dependent | rect. | 11 | 2 |
| 137 | 200.91 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 10 | 1 |
| 142 | 200.96 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 6 | 1 |
| 143 | 200.96 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 156 | 201.14 | wind | 1.0 | 90 | > th | dose dependent | rect. | 4 | 17 |
| 158 | 201.19 | wind | 7.0 | 30 | > th | dose independent | rect. | 17 | 10 |
| 166 | 201.26 | wind | 7.0 | 30 | > th | dose independent | rect. | 17 | 5 |
| 172 | 201.26 | wind | 1.0 | 90 | > th | dose dependent | rect. | 19 | 22 |
| 177 | 201.31 | wind | 1.0 | 90 | > th | dose dependent | rect. | 10 | 14 |
| 189 | 201.37 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 9 | 3 |
| 191 | 201.39 | wind | 1.0 | 90 | > th | dose dependent | rect. | 4 | 13 |
| 207 | 201.57 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 211 | 201.61 | wind | 7.0 | 90 | < th | dose dependent | sin | 0 | NA |
| 219 | 201.64 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 11 | 10 |
| 226 | 201.71 | wind | 1.0 | 90 | > th | dose dependent | rect. | 10 | 21 |
| 233 | 201.77 | wind | 5.0 | 90 | > th | dose independent | rect. | 10 | 7 |
| 242 | 201.83 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 2 | 1 |
| 243 | 201.83 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 2 | 1 |
| 250 | 201.87 | wind | 9.0 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 259 | 201.91 | wind | 1.0 | 90 | > th | dose dependent | rect. | 10 | 23 |
| 260 | 201.92 | wind | 5.0 | 90 | > th | dose independent | rect. | 10 | 4 |
| 263 | 201.93 | wind | 1.0 | 90 | > th | dose dependent | rect. | 4 | 20 |
| 267 | 201.96 | wind | 5.0 | 90 | < th | dose independent | sin | 2 | NA |
| 337 | 202.02 | wind | 3.0 | 90 | > th | dose independent | rect. | 10 | 13 |
| 340 | 202.03 | wind | 1.0 | 90 | > th | dose dependent | sin | 0 | NA |
| 342 | 202.03 | wind | 3.0 | 90 | > th | dose dependent | rect. | 10 | 7 |
| 356 | 202.11 | wind | 5.0 | 90 | > th | dose independent | rect. | 4 | 13 |
| 360 | 202.13 | wind | 5.0 | 90 | > th | dose independent | sin | 2 | NA |
| 371 | 202.16 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 372 | 202.17 | wind | 5.0 | 90 | > th | dose independent | rect. | 18 | 23 |
| 374 | 202.18 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 379 | 202.20 | wind | 5.0 | 90 | > th | dose independent | rect. | 4 | 10 |
| 401 | 202.21 | wind | 5.0 | 90 | > th | dose independent | rect. | 11 | 2 |
| 429 | 202.25 | radiation | 40.0 | 10 | > th | dose independent | rect. | 11 | 2 |
| 465 | 202.41 | wind | 5.0 | 90 | > th | dose independent | rect. | 10 | 20 |
| 522 | 202.55 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 9 | 7 |
| 523 | 202.55 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 7 | 9 |
| 539 | 202.56 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 11 | 5 |
| 551 | 202.60 | wind | 5.0 | 90 | < th | dose independent | rect. | 5 | 23 |
| 565 | 202.66 | wind | 5.0 | 90 | > th | dose independent | rect. | 22 | 19 |
| 589 | 202.72 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 613 | 202.77 | wind | 5.0 | 90 | > th | dose independent | rect. | 22 | 16 |
| 654 | 202.81 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 14 | 21 |
| 655 | 202.82 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 704 | 202.89 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 707 | 202.89 | radiation | 40.0 | 10 | > th | dose dependent | sin | 23 | NA |
| 717 | 202.90 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 10 | 8 |
| 731 | 202.90 | wind | 1.0 | 90 | > th | dose dependent | rect. | 23 | 22 |
| 740 | 202.92 | wind | 7.0 | 30 | > th | dose independent | rect. | 17 | 1 |
| 773 | 202.94 | humidity | 60.0 | 14400 | < th | dose dependent | sin | 4 | NA |
| 782 | 202.95 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 3 | 3 |
| 831 | 202.99 | wind | 5.0 | 90 | > th | dose independent | rect. | 19 | 19 |
| 850 | 203.01 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 851 | 203.01 | wind | 1.0 | 720 | > th | dose dependent | rect. | 10 | 3 |
| 857 | 203.01 | wind | 3.0 | 90 | > th | dose dependent | rect. | 22 | 19 |
| 920 | 203.05 | wind | 5.0 | 90 | < th | dose independent | rect. | 21 | 18 |
| 946 | 203.08 | wind | 5.0 | 90 | > th | dose independent | rect. | 4 | 17 |
| 953 | 203.10 | wind | 5.0 | 90 | > th | dose independent | rect. | 4 | 20 |
| 954 | 203.10 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |