Os02g0756300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0756300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.06 | 0.336 | 3.29 | 0.152 | 0.181 | 0.311 | -0.061 | 1.17 | -0.116 | 7.51 | 90 | 5929 | -- | -- |
| 53.03 | 0.339 | 3.29 | 0.0861 | 0.177 | 0.342 | -0.112 | -- | -0.14 | 7.24 | 90.99 | 5900 | -- | -- |
| 51.07 | 0.333 | 3.29 | 0.145 | 0.179 | 0.308 | -- | 1.17 | -0.113 | 7.55 | 89 | 5929 | -- | -- |
| 53.04 | 0.339 | 3.29 | 0.0784 | 0.176 | 0.344 | -- | -- | -0.14 | 7.57 | 91 | 5855 | -- | -- |
| 52.8 | 0.338 | 3.29 | 0.144 | -- | 0.311 | -- | 1.15 | -0.11 | -- | 89 | 5875 | -- | -- |
| 54.58 | 0.346 | 3.27 | 0.0543 | 0.178 | -- | -0.0798 | -- | -0.0717 | 7.47 | -- | -- | -- | -- |
| 54.59 | 0.346 | 3.27 | 0.0528 | 0.177 | -- | -- | -- | -0.0714 | 7.64 | -- | -- | -- | -- |
| 54.69 | 0.344 | 3.29 | 0.0819 | -- | 0.346 | -- | -- | -0.14 | -- | 91 | 5757 | -- | -- |
| 53.19 | 0.34 | 3.29 | -- | 0.178 | 0.331 | -- | -- | -0.142 | 7.53 | 89 | 5855 | -- | -- |
| 56.28 | 0.351 | 3.28 | 0.0552 | -- | -- | -- | -- | -0.0688 | -- | -- | -- | -- | -- |
| 54.66 | 0.346 | 3.27 | -- | 0.178 | -- | -- | -- | -0.0773 | 7.61 | -- | -- | -- | -- |
| 54.84 | 0.345 | 3.29 | -- | -- | 0.332 | -- | -- | -0.144 | -- | 89 | 5759 | -- | -- |
| 56.36 | 0.35 | 3.28 | -- | -- | -- | -- | -- | -0.0749 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.10 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 2 | 3 |
| 3 | 49.38 | temperature | 25 | 90 | > th | dose independent | rect. | 2 | 2 |
| 7 | 49.49 | temperature | 25 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 10 | 49.53 | temperature | 25 | 90 | > th | dose dependent | rect. | 1 | 4 |
| 12 | 49.59 | temperature | 25 | 90 | > th | dose independent | rect. | 1 | 4 |
| 17 | 50.06 | humidity | 80 | 14400 | < th | dose dependent | rect. | 5 | 4 |
| 20 | 50.11 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 4 |
| 30 | 50.38 | humidity | 70 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 37 | 50.56 | humidity | 70 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 38 | 50.56 | humidity | 70 | 14400 | > th | dose independent | rect. | 24 | 9 |
| 43 | 50.57 | humidity | 70 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 48 | 50.57 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 53 | 50.62 | humidity | 70 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 56 | 50.86 | humidity | 80 | 4320 | < th | dose independent | rect. | 5 | 8 |
| 58 | 50.87 | humidity | 70 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 70 | 50.88 | humidity | 70 | 4320 | > th | dose independent | rect. | 10 | 2 |
| 71 | 50.88 | humidity | 80 | 4320 | > th | dose independent | rect. | 5 | 8 |
| 86 | 50.90 | humidity | 70 | 4320 | > th | dose dependent | rect. | 5 | 7 |
| 112 | 50.94 | humidity | 90 | 10 | < th | dose independent | rect. | 3 | 2 |
| 115 | 50.94 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 130 | 50.97 | humidity | 50 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 149 | 51.00 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 3 | 23 |
| 171 | 51.03 | humidity | 90 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 192 | 51.04 | humidity | 90 | 4320 | < th | dose dependent | rect. | 3 | 11 |
| 212 | 51.06 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 2 | 3 |
| 242 | 51.07 | humidity | 70 | 4320 | > th | dose independent | sin | 5 | NA |
| 252 | 51.07 | humidity | 90 | 4320 | < th | dose dependent | rect. | 23 | 15 |
| 266 | 51.09 | humidity | 70 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 351 | 51.15 | humidity | 50 | 4320 | > th | dose dependent | sin | 4 | NA |
| 352 | 51.15 | humidity | 90 | 4320 | < th | dose dependent | sin | 4 | NA |
| 449 | 51.19 | humidity | 70 | 4320 | < th | dose independent | sin | 5 | NA |
| 494 | 51.21 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 507 | 51.21 | humidity | 60 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 541 | 51.23 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 723 | 51.31 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 856 | 51.37 | humidity | 50 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 937 | 51.41 | humidity | 90 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 976 | 51.43 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 4 |